RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 MYOZ3Q8TDC0 251 aa16.37■□□□□ 0.21
MAP1LC3A-204ENST00000476428 AIFM2Q9BRQ8 373 aa16.37■□□□□ 0.21
MAP1LC3A-204ENST00000476428 PLEKHA2Q9HB19 425 aa16.37■□□□□ 0.21
MAP1LC3A-204ENST00000476428 MSGN1A6NI15 193 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 DISC1C4P0D8 188 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 CREBL2O60519 120 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 KBTBD11O94819 623 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 NQO2P16083 231 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 PI3P19957 117 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 PTBP1P26599 531 aaKnown RBP eCLIP16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ETV6P41212 452 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 CDX1P47902 265 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 PPP5CP53041 499 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 POU2AF1Q16633 256 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ZNF585BQ52M93 769 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ASPHD1Q5U4P2 390 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 C8orf86Q6ZUL3 223 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 KLHL30-AS1Q8NEE0 82 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 CASTOR1Q8WTX7 329 aa16.36■□□□□ 0.21
MAP1LC3A-204ENST00000476428 WNK1Q9H4A3 2382 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 PLXNB1O43157 2135 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 OR4A47Q6IF82 309 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 Q8N402 240 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ZNF491Q8N8L2 437 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 OR5T1Q8NG75 326 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 OR5M8Q8NGP6 311 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 SRSF12Q8WXF0 261 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 MRGPRFQ96AM1 343 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ZNF486Q96H40 463 aaPredicted RBP16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 TMEM68Q96MH6 324 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 SLC2A9Q9NRM0 540 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 BET1LQ9NYM9 111 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 COMMD9Q9P000 198 aa16.35■□□□□ 0.21
MAP1LC3A-204ENST00000476428 MPPED1O15442 326 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ACTL6BO94805 426 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 IL6RP08887 468 aaPredicted RBP16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 SLC6A1P30531 599 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 RND3P61587 244 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 SPANXN2Q5MJ10 180 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 C10orf55Q5SWW7 151 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 OR4A5Q8NH83 315 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 ZFAND1Q8TCF1 268 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 MARCH1Q8TCQ1 289 aa16.34■□□□□ 0.21
MAP1LC3A-204ENST00000476428 PF4P02776 101 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 APELAP0DMC3 54 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 RPA2P15927 270 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 PIGPP57054 158 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 DEFA6Q01524 100 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 ETV3LQ6ZN32 361 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 DMBX1Q8NFW5 382 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 OR51S1Q8NGJ8 323 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 OR13C8Q8NGS7 320 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 TRIM63Q969Q1 353 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 UBE2E2Q96LR5 201 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MS4A10Q96PG2 267 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 PHB2Q99623 299 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 HRASLSQ9HDD0 168 aa16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 FAM212BQ9NTI7 297 aaPredicted RBP16.33■□□□□ 0.2
MAP1LC3A-204ENST00000476428 TRAV3A0A0B4J244 114 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 A6NHS1 94 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 UPK2O00526 184 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 CTSDP07339 412 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MAS1LP35410 378 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 RPL8P62917 257 aaKnown RBP16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 KLF9Q13886 244 aaPredicted RBP16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 WFDC9Q8NEX5 89 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 PRRT1Q99946 306 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 GNB4Q9HAV0 340 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 TMEM140Q9NV12 185 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 VSIG4Q9Y279 399 aa16.32■□□□□ 0.2
MAP1LC3A-204ENST00000476428 E7EUB6 86 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 KRASP01116 189 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MYOD1P15172 320 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 HLA-GP17693 338 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 CD40LGP29965 261 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MYCNOSP40205 109 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 ECI1P42126 302 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 ERVK-16P61578 105 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 C4orf3Q8WVX3 66 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 RAX2Q96IS3 184 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 DUX3Q96PT4 197 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 SPIN2AQ99865 258 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 SPIN2BQ9BPZ2 258 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 SRRQ9GZT4 340 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 ZNF355PQ9NSJ1 428 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 COPZ2Q9P299 210 aa16.31■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MARCH11A6NNE9 402 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 CCL24O00175 119 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 G6PCP35575 357 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 RPL27AP46776 148 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 SURF2Q15527 256 aaPredicted RBP16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 DEFB136Q30KP8 78 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MRPL41Q8IXM3 137 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 TOMM5Q8N4H5 51 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 OR5B12Q96R08 314 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 P2RX4Q99571 388 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 RTBDNQ9BSG5 229 aaPredicted RBP16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 SLA2Q9H6Q3 261 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 MCUBQ9NWR8 336 aa16.3■□□□□ 0.2
MAP1LC3A-204ENST00000476428 SLC2A8Q9NY64 477 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms