RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 TMEM106BQ9NUM4 274 aa12.21□□□□□ -0.45
SSPO-205ENST00000475488 MT-ND6P03923 174 aa12.21□□□□□ -0.45
SSPO-205ENST00000475488 VSIG8P0DPA2 414 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 UBE2V2Q15819 145 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 PMCHL1Q16048 86 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 FDCSPQ8NFU4 85 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 MBD3L1Q8WWY6 194 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 SCN4AP35499 1836 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 ZNF729A6NN14 1252 aaPredicted RBP12.21□□□□□ -0.46
SSPO-205ENST00000475488 HLA-DQA1P01909 254 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 TDGF1P3P51864 188 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.46
SSPO-205ENST00000475488 HLA-DRB1P01911 266 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 BIVMQ86UB2 503 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 RHOVQ96L33 236 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 TNFSF18Q9UNG2 199 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 MOSP00540 346 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 PMCHL2Q9BQD1 86 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 PEX11BO96011 259 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 KIAA0040Q15053 153 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 C8orf46Q8TAG6 207 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
SSPO-205ENST00000475488 GPR183P32249 361 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 FGFRL1Q8N441 504 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 MRPL32Q9BYC8 188 aaKnown RBP12.2□□□□□ -0.46
SSPO-205ENST00000475488 FOXA2Q9Y261 457 aaPredicted RBP12.2□□□□□ -0.46
SSPO-205ENST00000475488 PEBP1P30086 187 aaKnown RBP12.2□□□□□ -0.46
SSPO-205ENST00000475488 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 SCGB3A1Q96QR1 104 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 JPT1Q9UK76 154 aa12.2□□□□□ -0.46
SSPO-205ENST00000475488 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 PSME4Q14997 1843 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 PAX1P15863 534 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 PTGDSP41222 190 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 ICAM4Q14773 271 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 ZIC3O60481 467 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
SSPO-205ENST00000475488 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 SAPCD1Q5SSQ6 148 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 LEMD1Q68G75 181 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 RUNX1Q01196 453 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 UNC119Q13432 240 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 SLC22A18ASQ8N1D0 253 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 SPSB4Q96A44 273 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 C18orf15Q96N68 181 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 CD33P20138 364 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 HOXA5P20719 270 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 RPRMQ9NS64 109 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 MDKP21741 143 aaPredicted RBP12.19□□□□□ -0.46
SSPO-205ENST00000475488 GLMPQ8WWB7 406 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 PRSS22Q9GZN4 317 aa12.19□□□□□ -0.46
SSPO-205ENST00000475488 AHCTF1Q8WYP5 2266 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 PGLYRP1O75594 196 aaPredicted RBP12.18□□□□□ -0.46
SSPO-205ENST00000475488 NDUFA3O95167 84 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 CRYBB3P26998 211 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 OR4D11Q8NGI4 311 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 ZNF703Q9H7S9 590 aaPredicted RBP12.18□□□□□ -0.46
SSPO-205ENST00000475488 LOC101059948A0A1B0GTJ6 334 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 NPIPB4C9JG80 1138 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 ZAR1Q86SH2 424 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 DLL3Q9NYJ7 618 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 TUBD1Q9UJT1 453 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 C1QTNF12Q5T7M4 302 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 RNASEH2CQ8TDP1 164 aaKnown RBP12.18□□□□□ -0.46
SSPO-205ENST00000475488 LEPP41159 167 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 C3orf36Q3SXR2 165 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 OR10S1Q8NGN2 331 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 ASCL4Q6XD76 172 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 CYP2G1PQ6ZSU1 146 aa12.18□□□□□ -0.46
SSPO-205ENST00000475488 TRAV12-3A0A0B4J271 114 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 PEX7O00628 323 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 MYOD1P15172 320 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
SSPO-205ENST00000475488 HMGA2P52926 109 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 TNFRSF9Q07011 255 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 PKIBQ9C010 78 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 DTX4Q9Y2E6 619 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 CD7P09564 240 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 A0A1W2PPV9 198 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
SSPO-205ENST00000475488 CD8AP01732 235 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 OR11H4Q8NGC9 324 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 CABIN1Q9Y6J0 2220 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 FOXS1O43638 330 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 ERGP11308 486 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
SSPO-205ENST00000475488 LRTM2Q8N967 370 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms