RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SNAPC3Q92966 411 aa7.24□□□□□ -1.25
PDPN-204ENST00000475043 USMG5Q96IX5 58 aa7.24□□□□□ -1.25
PDPN-204ENST00000475043 FYTTD1Q96QD9 318 aaKnown RBP7.24□□□□□ -1.25
PDPN-204ENST00000475043 OR2A7Q96R45 310 aa7.24□□□□□ -1.25
PDPN-204ENST00000475043 FUNDC2Q9BWH2 189 aa7.24□□□□□ -1.25
PDPN-204ENST00000475043 EHFQ9NZC4 300 aa7.24□□□□□ -1.25
PDPN-204ENST00000475043 COMMD3Q9UBI1 195 aa7.24□□□□□ -1.25
PDPN-204ENST00000475043 PEF1Q9UBV8 284 aaKnown RBP7.24□□□□□ -1.25
PDPN-204ENST00000475043 DPPA5A6NC42 116 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 HMX3A6NHT5 357 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 SULT1C2O00338 296 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 KBTBD11O94819 623 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 BRI3O95415 125 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 PRSS3P35030 304 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 KIR2DS2P43631 304 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 RPL27AP46776 148 aaKnown RBP7.23□□□□□ -1.25
PDPN-204ENST00000475043 RFX2P48378 723 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 SYNJ2BPP57105 145 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 BRWD1-AS2P59051 145 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 TAS2R20P59543 309 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 HERV-K104P61576 105 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 VBP1P61758 197 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 NCS1P62166 190 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 RHOGP84095 191 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 CATR1Q13166 79 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
PDPN-204ENST00000475043 DYRK1AQ13627 763 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 ZNF343Q6P1L6 599 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 HAPLN4Q86UW8 402 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 ANKRD13BQ86YJ7 626 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 ZBTB34Q8NCN2 500 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 GIMAP1Q8WWP7 306 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 SLC25A46Q96AG3 418 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 ASCL2Q99929 193 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 HRASLSQ9HDD0 168 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 AKIP1Q9NQ31 210 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 SMAD5-AS1Q9Y6J3 95 aa7.23□□□□□ -1.25
PDPN-204ENST00000475043 SMIM31A0A1B0GVY4 71 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 FAM223BA6NKX1 122 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 RBMXL2O75526 392 aaKnown RBP7.22□□□□□ -1.25
PDPN-204ENST00000475043 TRBV12-3P01733 135 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 PMP2P02689 132 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 EIF4EP06730 217 aaKnown RBP7.22□□□□□ -1.25
PDPN-204ENST00000475043 NHLRC4P0CG21 123 aaPredicted RBP7.22□□□□□ -1.25
PDPN-204ENST00000475043 GP9P14770 177 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 ZNF45Q02386 682 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 ATP5G2Q06055 141 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 EXOSC2Q13868 293 aaKnown RBP7.22□□□□□ -1.25
PDPN-204ENST00000475043 MSMO1Q15800 293 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 TATDN3Q17R31 274 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 RPEL1Q2QD12 228 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 AADACL3Q5VUY0 350 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 ZNF818PQ6ZRF7 136 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 SLC25A42Q86VD7 318 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 FAM223AQ8IWN6 122 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 PUSL1Q8N0Z8 303 aaKnown RBP7.22□□□□□ -1.25
PDPN-204ENST00000475043 TTC9CQ8N5M4 171 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 OR9G4Q8NGQ1 327 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 OR5H2Q8NGV7 314 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 OR51H1Q8NH63 302 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 TMEM167AQ8TBQ9 72 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 BORCS5Q969J3 196 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 AIFM2Q9BRQ8 373 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 ZNF2Q9BSG1 426 aaPredicted RBP7.22□□□□□ -1.25
PDPN-204ENST00000475043 ADAM30Q9UKF2 790 aa7.22□□□□□ -1.25
PDPN-204ENST00000475043 A6NHS1 94 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 TRIM64CA6NLI5 447 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 TEX22C9J3V5 150 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 E7EUB6 86 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 OR2J3O76001 311 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 HPRT1P00492 218 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 IL6RP08887 468 aaPredicted RBP7.21□□□□□ -1.26
PDPN-204ENST00000475043 MAS1LP35410 378 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 TAS2R46P59540 309 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 RPL8P62917 257 aaKnown RBP7.21□□□□□ -1.26
PDPN-204ENST00000475043 KLF5Q13887 457 aaPredicted RBP7.21□□□□□ -1.26
PDPN-204ENST00000475043 C15orf32Q32M92 178 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 OR4A47Q6IF82 309 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 C19orf35Q6ZS72 473 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 NECAP1Q8NC96 275 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 DMBX1Q8NFW5 382 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 SLC2A9Q9NRM0 540 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 ZNF257Q9Y2Q1 563 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 U3KQK5 164 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
PDPN-204ENST00000475043 DNAH3Q8TD57 4116 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 TRBV9A0A0B4J1U6 114 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 RBFOX2O43251 390 aaKnown RBP eCLIP7.2□□□□□ -1.26
PDPN-204ENST00000475043 HPGDSO60760 199 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 DHFRP00374 187 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 IGLV1-51P01701 117 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 APOA1P02647 267 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 RLN1P04808 185 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 REG1AP05451 166 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 ZNF735P0CB33 412 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 DEFA4P12838 97 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 MYOD1P15172 320 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 AREGP15514 252 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 RPA2P15927 270 aa7.2□□□□□ -1.26
PDPN-204ENST00000475043 NQO2P16083 231 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms