RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 IGHV1-24A0A0C4DH33 117 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF716A6NP11 495 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 AMY1AP04745 511 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 HNRNPA1P09651 372 aaKnown RBP eCLIP3.35□□□□□ -1.87
USP16-205ENST00000474835 CBLN1P23435 193 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF41P51814 821 aaPredicted RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 HIST1H1AQ02539 215 aaPredicted RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 SRSF1Q07955 248 aaKnown RBP eCLIP3.35□□□□□ -1.87
USP16-205ENST00000474835 LDLRAD2Q5SZI1 272 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF468Q5VIY5 522 aaPredicted RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 HLA-DQA1Q5Y7H0 255 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF611Q8N823 705 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 OR10V1Q8NGI7 309 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 GTSF1Q8WW33 167 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 TMEM147Q9BVK8 224 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 GFRA4Q9GZZ7 299 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF71Q9NQZ8 489 aaPredicted RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 JPT1Q9UK76 154 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 GRIFINA4D1Z8 144 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 FAM231BA6NCW3 169 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 LRRC30A6NM36 301 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 E9PLD3 99 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 C11orf98E9PRG8 122 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 RER1O15258 196 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 DNPH1O43598 174 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 GDF9O60383 454 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 IGLV2-11P01706 119 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 B4GALT1P15291 398 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 FKBP2P26885 142 aaKnown RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 FAM78BQ5VT40 261 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 KCNIP4Q6PIL6 250 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 Q6ZR03 302 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 OR4F5Q8NH21 305 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 BADQ92934 168 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF479Q96JC4 524 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 SPACA5Q96QH8 159 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ST6GALNAC5Q9BVH7 336 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 FBRSQ9HAH7 460 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 MED29Q9NX70 200 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 IDI2-AS1Q9NZ38 188 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 KCNIP1Q9NZI2 227 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 GSKIPQ9P0R6 139 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 LILRA5A6NI73 299 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 H3BSH0 61 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 SCTP09683 121 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF10P21506 573 aaPredicted RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 SMCPP49901 116 aaPredicted RBP3.35□□□□□ -1.87
USP16-205ENST00000474835 NHLH1Q02575 133 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 TLE3Q04726 772 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF146Q15072 292 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 KLK9Q2XQG4 91 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 SPRNQ5BIV9 151 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 PRR31Q5SQ13 230 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 C1orf185Q5T7R7 199 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 MCEMP1Q8IX19 187 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZBTB34Q8NCN2 500 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 OR1B1Q8NGR6 318 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 OR1N2Q8NGR9 330 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 TMEM45BQ96B21 275 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 OXGR1Q96P68 337 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ZNF492Q9P255 531 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 KLK9Q9UKQ9 250 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 PAM16Q9Y3D7 125 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 OR51B2Q9Y5P1 312 aa3.35□□□□□ -1.87
USP16-205ENST00000474835 ASCC3Q8N3C0 2202 aaKnown RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 IGKV3D-15A0A087WSY6 115 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 SYS1-DBNDD2H3BUS1 97 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 RAB29O14966 203 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 PHF1O43189 567 aaPredicted RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 CST7O76096 145 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 COL8A2P25067 703 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 CDAP32320 146 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 FOXL2P58012 376 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 RPS21P63220 83 aaKnown RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 ID2Q02363 134 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 CFHR1Q03591 330 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 TNXAQ16473 311 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 WDR73Q6P4I2 378 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 RD3Q7Z3Z2 195 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 ZDHHC23Q8IYP9 409 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 OR52L2PQ8NGH6 319 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 OR5A2Q8NGI9 324 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 OR9G1Q8NH87 305 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 NEU4Q8WWR8 484 aaPredicted RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 LHX4Q969G2 390 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 SPACA9Q96E40 222 aaPredicted RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 PMCHL2Q9BQD1 86 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 HHLA3Q9XRX5 114 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 LOC102723996A0A087X1L8 192 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 SCO2A0A1W2PP80 73 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 GOSR1O95249 250 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 CLDN14O95500 239 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 HLA-DQA1P01909 254 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 CELA2BP08218 269 aaPredicted RBP3.34□□□□□ -1.87
USP16-205ENST00000474835 CRISP2P16562 243 aa3.34□□□□□ -1.87
USP16-205ENST00000474835 TNFRSF4P43489 277 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9003.8 ms