RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 RPA2P15927 270 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-204ENST00000474644 CFHR3Q02985 330 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 FXYD3Q14802 87 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
COL1A1-204ENST00000474644 HIST2H2BDQ6DRA6 164 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 CENPVQ7Z7K6 275 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-204ENST00000474644 C11orf44Q8N8P7 122 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 OR5AU1Q8NGC0 362 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 ABHD5Q8WTS1 349 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
COL1A1-204ENST00000474644 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 BET1LQ9NYM9 111 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 TRAV41A0A0B4J266 112 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-204ENST00000474644 G3V318 75 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 LYRM1O43325 122 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 FBXO24O75426 580 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 B3GALNT1O75752 331 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 NDUFB6O95139 128 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 KRASP01116 189 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 SERPINE2P07093 398 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 OR5AC1P0C628 307 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 CD28P10747 220 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 VDAC1P21796 283 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 ERVK-16P61578 105 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 SLC35B1P78383 322 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 TNXAQ16473 311 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 ECSCRQ19T08 205 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 SP6Q3SY56 376 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 C19orf54Q5BKX5 351 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 GRPEL2Q8TAA5 225 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 WSB1Q9Y6I7 421 aa12.37□□□□□ -0.43
COL1A1-204ENST00000474644 UPK1BO75841 260 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 CNIH1O95406 144 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 IL6RP08887 468 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-204ENST00000474644 AKR1C4P17516 323 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 UCP1P25874 307 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 G6PCP35575 357 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 TCTEX1D4Q5JR98 221 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 SGPP2Q8IWX5 399 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 OR4A5Q8NH83 315 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 SEC22AQ96IW7 307 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 TMEM222Q9H0R3 208 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 TBC1D24Q9ULP9 559 aa12.36□□□□□ -0.43
COL1A1-204ENST00000474644 TRAV3A0A0B4J244 114 aa12.35□□□□□ -0.43
COL1A1-204ENST00000474644 UPK2O00526 184 aa12.35□□□□□ -0.43
COL1A1-204ENST00000474644 ACTL6BO94805 426 aa12.35□□□□□ -0.43
COL1A1-204ENST00000474644 PPIFP30405 207 aaKnown RBP12.35□□□□□ -0.43
COL1A1-204ENST00000474644 RPL8P62917 257 aaKnown RBP12.35□□□□□ -0.43
COL1A1-204ENST00000474644 TRIM16LQ309B1 348 aa12.35□□□□□ -0.43
COL1A1-204ENST00000474644 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
COL1A1-204ENST00000474644 NUBP2Q9Y5Y2 271 aa12.35□□□□□ -0.43
COL1A1-204ENST00000474644 HLA-GP17693 338 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 MAS1LP35410 378 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 SUPT4H1P63272 117 aaKnown RBP12.34□□□□□ -0.43
COL1A1-204ENST00000474644 IFITM3Q01628 133 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 ASAH1Q13510 395 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 CADM3Q8N126 398 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 COMMD1Q8N668 190 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 LFNGQ8NES3 379 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 GLYATL2Q8WU03 294 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 GALNT14Q96FL9 552 aa12.34□□□□□ -0.43
COL1A1-204ENST00000474644 CITED2Q99967 270 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-204ENST00000474644 CDS2O95674 445 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 IGHG4P01861 327 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 FGF2P09038 288 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 OR9G9P0C7N8 305 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 MYOD1P15172 320 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 CD83Q01151 205 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 DHODHQ02127 395 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM267Q0VDI3 215 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-204ENST00000474644 AKIRIN2Q53H80 203 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM128Q5BJH2 165 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 UNQ5815/PRO19632Q6UWF5 114 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 LHFPL5Q8TAF8 219 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 PHB2Q99623 299 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 FLVCR2Q9UPI3 526 aa12.33□□□□□ -0.44
COL1A1-204ENST00000474644 FOXA2Q9Y261 457 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-204ENST00000474644 A0A1W2PN81 502 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 MSGN1A6NI15 193 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 SOX15O60248 233 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 ATG12O94817 140 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 IGLV1-40P01703 118 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 ELANEP08246 267 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 P0C879 139 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms