RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 IL7P13232 177 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 RAB9AP51151 201 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 RPL30P62888 115 aaKnown RBP11.77□□□□□ -0.53
VARS-223ENST00000474643 CX3CL1P78423 397 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 KLF9Q13886 244 aaPredicted RBP11.77□□□□□ -0.53
VARS-223ENST00000474643 BAK1Q16611 211 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 ZNF660Q6AZW8 331 aaPredicted RBP11.77□□□□□ -0.53
VARS-223ENST00000474643 ZNF491Q8N8L2 437 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 OR4S2Q8NH73 311 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 OSR1Q8TAX0 266 aaPredicted RBP11.77□□□□□ -0.53
VARS-223ENST00000474643 DDB2Q92466 427 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 GPHA2Q96T91 129 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 KLK15Q9H2R5 256 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 SLC2A8Q9NY64 477 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 ZNF256Q9Y2P7 627 aaPredicted RBP11.77□□□□□ -0.53
VARS-223ENST00000474643 M0QYG6 137 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 FCN1O00602 326 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 SAP30O75446 220 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 RAB3DO95716 219 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 CD3DP04234 171 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 S100GP29377 79 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 KIR2DS2P43631 304 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 INPP1P49441 399 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 INSL3P51460 131 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 AADACL3Q5VUY0 350 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 POC5Q8NA72 575 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 GRPEL2Q8TAA5 225 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 MOB3AQ96BX8 217 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 PALMDQ9NP74 551 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
VARS-223ENST00000474643 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 OVOL1O14753 267 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 UPK1BO75841 260 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 ACTL6BO94805 426 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 IGLV1-40P01703 118 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
VARS-223ENST00000474643 PPIFP30405 207 aaKnown RBP11.75□□□□□ -0.53
VARS-223ENST00000474643 UCP3P55916 312 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 TPPP2P59282 170 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 FHL3Q13643 280 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 FXYD3Q14802 87 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 UNQ5815/PRO19632Q6UWF5 114 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 ZNF562Q6V9R5 426 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 CMTM1Q8IZ96 169 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 ARPC1AQ92747 370 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 PRRT1Q99946 306 aa11.75□□□□□ -0.53
VARS-223ENST00000474643 FAM103A1Q9BTL3 118 aaKnown RBP11.75□□□□□ -0.53
VARS-223ENST00000474643 CENPXA8MT69 81 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 LINC01619G3V211 115 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 CREBL2O60519 120 aaPredicted RBP11.74□□□□□ -0.53
VARS-223ENST00000474643 IGLV2-23P01705 113 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 UBE2KP61086 200 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 RUNX1Q01196 453 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
VARS-223ENST00000474643 IDO2Q6ZQW0 420 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 TEX45Q8NA69 505 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 TERB2Q8NHR7 220 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 CASTOR1Q8WTX7 329 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 PHB2Q99623 299 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 FXYD6Q9H0Q3 95 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 SCP2D1Q9UJQ7 156 aa11.74□□□□□ -0.53
VARS-223ENST00000474643 SRRM4A7MD48 611 aaKnown RBP11.73□□□□□ -0.53
VARS-223ENST00000474643 I3L521 148 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 GPR31O00270 319 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 HRASP01112 189 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 RLN1P04808 185 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
VARS-223ENST00000474643 PGAM2P15259 253 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 TNCP24821 2201 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 GNRHRP30968 328 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 NDPQ00604 133 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 PJVKQ0ZLH3 352 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 TNXAQ16473 311 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 ZNF429Q86V71 674 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 LHFPL1Q86WI0 220 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 MINDY2Q8NBR6 621 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 LFNGQ8NES3 379 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 OR4C16Q8NGL9 310 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 MYOZ3Q8TDC0 251 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 SCGB3A2Q96PL1 93 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 TINAGL1Q9GZM7 467 aaPredicted RBP11.73□□□□□ -0.53
VARS-223ENST00000474643 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
VARS-223ENST00000474643 IGHV3-11P01762 117 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 TRGV3P03979 118 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 EIF4EBP1Q13541 118 aaPredicted RBP11.72□□□□□ -0.53
VARS-223ENST00000474643 SCGB2B2Q4G0G5 96 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 PHLDA2Q53GA4 152 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
VARS-223ENST00000474643 SSX9Q7RTT3 188 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 VKORC1L1Q8N0U8 176 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms