RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 IRF2P14316 349 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 GPX4P36969 197 aaPredicted RBP17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 SSTP61278 116 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 PKIAP61925 76 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 LRRC75BQ2VPJ9 315 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 SMIM21Q3B7S5 101 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 TMEM41BQ5BJD5 291 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 ABHD5Q8WTS1 349 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 FRZBQ92765 325 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 GPR61Q9BZJ8 451 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 WIPI2Q9Y4P8 454 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 PHOX2AO14813 284 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 TMEM267Q0VDI3 215 aaPredicted RBP17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 OR5R1Q8NH85 324 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 RNASE11Q8TAA1 199 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 TIMM9Q9Y5J7 89 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 A0A0G2JRQ6 117 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 OVOL3O00110 214 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 SH2D1BO14796 132 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 GYPAP02724 150 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 SELLP14151 372 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 MDH2P40926 338 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 GABRA2P47869 451 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 COL10A1Q03692 680 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 MOB1BQ7L9L4 216 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 PSENENQ9NZ42 101 aa17.16■□□□□ 0.34
SMIM11A-204ENST00000474455 MAP1AP78559 2803 aaPredicted RBP17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 ZFP92A6NM28 416 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 FAM90A26D6RGX4 464 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 PRDX2P32119 198 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 C5orf24Q7Z6I8 188 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 OR10V1Q8NGI7 309 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 ZNF665Q9H7R5 613 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 NAT8Q9UHE5 227 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 ARHGAP32A7KAX9 2087 aa17.15■□□□□ 0.34
SMIM11A-204ENST00000474455 APCP25054 2843 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 LRRC30A6NM36 301 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 TNFSF12O43508 249 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 NXPH3O95157 252 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 REC114Q7Z4M0 266 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 ZNRF1Q8ND25 227 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 GPHA2Q96T91 129 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 CCL19Q99731 98 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 PYGO2Q9BRQ0 406 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 ANKRD17O75179 2603 aaKnown RBP17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 MED13LQ71F56 2210 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 OOEPA6NGQ2 149 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 TSTD3H0UI37 97 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 ZNF726P1Q15940 193 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 TEX36Q5VZQ5 186 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 C20orf204Q6ZNR8 217 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 FGFRL1Q8N441 504 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 OR10A7Q8NGE5 316 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 RSG1Q9BU20 258 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 SRD5A3Q9H8P0 318 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 CACNG5Q9UF02 275 aa17.14■□□□□ 0.33
SMIM11A-204ENST00000474455 YLPM1P49750 1951 aaKnown RBP17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 PPIAL4EA0A075B759 164 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 SMCO3A2RU48 225 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 PPIAL4DF5H284 164 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 PPIAL4FP0DN26 164 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 STUMQ69YW2 141 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 FIP1L1Q6UN15 594 aaKnown RBP17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 LCN15Q6UWW0 184 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 NEU4Q8WWR8 484 aaPredicted RBP17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 CCL13Q99616 98 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 LIN7CQ9NUP9 197 aaKnown RBP17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 PPIAL4AQ9Y536 164 aa17.13■□□□□ 0.33
SMIM11A-204ENST00000474455 H3BP45 60 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 DVL1O14640 695 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 GFI1BQ5VTD9 330 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 LYPD2Q6UXB3 125 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 CYP2G1PQ6ZSU1 146 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 CENPVQ7Z7K6 275 aaPredicted RBP17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 RNASEH2CQ8TDP1 164 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 WDR61Q9GZS3 305 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 TRAV39A0A0B4J263 110 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 MAP1LC3B2A6NCE7 125 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 CEBPZOSA8MTT3 80 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 FABP4P15090 132 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 WDR25Q64LD2 544 aaPredicted RBP17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 TMEM183AQ8IXX5 376 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 LILRB2Q8N423 598 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 OR51H1Q8NH63 302 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 PACRGQ96M98 296 aaPredicted RBP17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 MAP1LC3BQ9GZQ8 125 aa17.12■□□□□ 0.33
SMIM11A-204ENST00000474455 FCN3O75636 299 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 RD3LP0DJH9 198 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 CDPF1Q6NVV7 123 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 Q6ZRM9 215 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 FAM216BQ8N7L0 139 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 TPRX1Q8N7U7 411 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 C14orf144Q96I85 54 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 GAFA1Q96PS6 74 aa17.11■□□□□ 0.33
SMIM11A-204ENST00000474455 RNF212BA8MTL3 300 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 ZNF737O75373 536 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 IGKV1-39P01597 117 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 IGHV4-39P01824 125 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 IGKV1D-39P04432 117 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 OR3A1P47881 315 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms