RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 RPL27AP46776 148 aaKnown RBP15.5■□□□□ 0.07
PDLIM4-206ENST00000474421 NEDD8Q15843 81 aa15.5■□□□□ 0.07
PDLIM4-206ENST00000474421 PUSL1Q8N0Z8 303 aaKnown RBP15.5■□□□□ 0.07
PDLIM4-206ENST00000474421 KCTD12Q96CX2 325 aaKnown RBP15.5■□□□□ 0.07
PDLIM4-206ENST00000474421 TM2D3Q9BRN9 247 aa15.5■□□□□ 0.07
PDLIM4-206ENST00000474421 ADAM30Q9UKF2 790 aa15.5■□□□□ 0.07
PDLIM4-206ENST00000474421 NPIPB5A8MRT5 1133 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 BMPR1BO00238 502 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 DHFRP00374 187 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 CBX5P45973 191 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 C15orf32Q32M92 178 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 TIMM50Q3ZCQ8 353 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 KCTD21Q4G0X4 260 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 CROCCP3Q8IVE0 287 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 OR13F1Q8NGS4 319 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 SECTM1Q8WVN6 248 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 RNF167Q9H6Y7 350 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 SLC2A9Q9NRM0 540 aa15.49■□□□□ 0.07
PDLIM4-206ENST00000474421 TEX22C9J3V5 150 aa15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 OR2J3O76001 311 aa15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 ZNF735P0CB33 412 aa15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 GVQW1Q8N7I0 195 aa15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 OR4A5Q8NH83 315 aa15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 FYTTD1Q96QD9 318 aaKnown RBP15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 AUNIPQ9H7T9 357 aa15.48■□□□□ 0.07
PDLIM4-206ENST00000474421 HMX3A6NHT5 357 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 RBFOX2O43251 390 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 PPYP01298 95 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 IL6RP08887 468 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 BRWD1-AS2P59051 145 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 RPL8P62917 257 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 CATR1Q13166 79 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 CITED4Q96RK1 184 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 THAP7Q9BT49 309 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 SLC5A7Q9GZV3 580 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 TUBA4BQ9H853 241 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 CCL28Q9NRJ3 127 aa15.47■□□□□ 0.07
PDLIM4-206ENST00000474421 GGCTO75223 188 aaKnown RBP15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 CRYGCP07315 174 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 MECP2P51608 486 aaKnown RBP15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 CASC10Q5T4H9 136 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 LAX1Q8IWV1 398 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 SPAG16Q8N0X2 631 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 BORCS5Q969J3 196 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 BET1LQ9NYM9 111 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 FBXL7Q9UJT9 491 aa15.46■□□□□ 0.07
PDLIM4-206ENST00000474421 TNFSF12O43508 249 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 LYL1P12980 280 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 HIST1H1BP16401 226 aaKnown RBP15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 HLA-GP17693 338 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 PSMB6P28072 239 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 TAS2R31P59538 309 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 SSX9Q7RTT3 188 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 OR5AP2Q8NGF4 316 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 DYNLRB2Q8TF09 96 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 GIMAP1Q8WWP7 306 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 S100A16Q96FQ6 103 aaKnown RBP15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 GPHA2Q96T91 129 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 SPATA25Q9BR10 227 aa15.45■□□□□ 0.06
PDLIM4-206ENST00000474421 XRCC3O43542 346 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 HPRT1P00492 218 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 PTHLHP12272 177 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 KLK9Q2XQG4 91 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 OR4A47Q6IF82 309 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 CD300LFQ8TDQ1 290 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 HRASLSQ9HDD0 168 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 VCX3AQ9NNX9 186 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 PALMDQ9NP74 551 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 IFT46Q9NQC8 304 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 KLK9Q9UKQ9 250 aa15.44■□□□□ 0.06
PDLIM4-206ENST00000474421 IZUMO1RA6ND01 250 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 PPP5D1E7EU14 171 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 E7EUB6 86 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 LGALS9O00182 355 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 SULT1C2O00338 296 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 DEFA4P12838 97 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 NQO2P16083 231 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 CTRB1P17538 263 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 FXYD4P59646 89 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 HERV-K104P61576 105 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 POU2AF1Q16633 256 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 CTRB2Q6GPI1 263 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 GPHB5Q86YW7 130 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 EEF1AKMT3Q96AZ1 226 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 FANCD2OSQ96PS1 177 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 SLC2A8Q9NY64 477 aa15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 TECRQ9NZ01 308 aaKnown RBP15.43■□□□□ 0.06
PDLIM4-206ENST00000474421 A0A1B0GW64 132 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 FGF2P09038 288 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 AREGP15514 252 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 HAGHQ16775 308 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 CD300EQ496F6 205 aaPredicted RBP15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 UBE2NLQ5JXB2 153 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 ISOC1Q96CN7 298 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 SRSF8Q9BRL6 282 aaKnown RBP15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 DMRT1Q9Y5R6 373 aa15.42■□□□□ 0.06
PDLIM4-206ENST00000474421 C2orf70A6NJV1 201 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 TPPPO94811 219 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 NDUFB8O95169 186 aa15.41■□□□□ 0.06
PDLIM4-206ENST00000474421 OR2C1O95371 312 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms