RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ARPC1BO15143 372 aaKnown RBP9.75□□□□□ -0.85
DDX56-209ENST00000473924 KBTBD11O94819 623 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 SERPINE2P07093 398 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 RPA2P15927 270 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 CHRNA7P36544 502 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 CD83Q01151 205 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 C2orf68Q2NKX9 166 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 CXorf66Q5JRM2 361 aaPredicted RBP9.75□□□□□ -0.85
DDX56-209ENST00000473924 OR4A47Q6IF82 309 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 UNQ5815/PRO19632Q6UWF5 114 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 NDUFA11Q86Y39 141 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 PUSL1Q8N0Z8 303 aaKnown RBP9.75□□□□□ -0.85
DDX56-209ENST00000473924 LFNGQ8NES3 379 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 FAM212BQ9NTI7 297 aaPredicted RBP9.75□□□□□ -0.85
DDX56-209ENST00000473924 GPR132Q9UNW8 380 aa9.75□□□□□ -0.85
DDX56-209ENST00000473924 TSSC4Q9Y5U2 329 aaPredicted RBP9.75□□□□□ -0.85
DDX56-209ENST00000473924 MARCH11A6NNE9 402 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 CENPXA8MT69 81 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 H0Y980 276 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 KRASP01116 189 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 ELANEP08246 267 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 IL7P13232 177 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 CD40LGP29965 261 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 CRIP2P52943 208 aaPredicted RBP9.74□□□□□ -0.85
DDX56-209ENST00000473924 FOXE3Q13461 319 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 ZNF585BQ52M93 769 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 AKIRIN2Q53H80 203 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 TCTEX1D4Q5JR98 221 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 OR4A5Q8NH83 315 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 TMEM167AQ8TBQ9 72 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
DDX56-209ENST00000473924 SDHCQ99643 169 aaPredicted RBP9.74□□□□□ -0.85
DDX56-209ENST00000473924 RTBDNQ9BSG5 229 aaPredicted RBP9.74□□□□□ -0.85
DDX56-209ENST00000473924 C5orf66Q9H5L9 145 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 AKIP1Q9NQ31 210 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 TMEM140Q9NV12 185 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 BET1LQ9NYM9 111 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
DDX56-209ENST00000473924 NUBP2Q9Y5Y2 271 aa9.74□□□□□ -0.85
DDX56-209ENST00000473924 NAP1L6A6NFF2 107 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 MSGN1A6NI15 193 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 B3GALNT1O75752 331 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 IGHG4P01861 327 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 PF4V1P10720 104 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 EGR2P11161 476 aaPredicted RBP9.73□□□□□ -0.85
DDX56-209ENST00000473924 PPIFP30405 207 aaKnown RBP9.73□□□□□ -0.85
DDX56-209ENST00000473924 MAS1LP35410 378 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 G6PCP35575 357 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 RPL8P62917 257 aaKnown RBP9.73□□□□□ -0.85
DDX56-209ENST00000473924 SSBP2P81877 361 aaPredicted RBP9.73□□□□□ -0.85
DDX56-209ENST00000473924 CFHR3Q02985 330 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 SP6Q3SY56 376 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 SGPP2Q8IWX5 399 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 MINDY2Q8NBR6 621 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 TP53RKQ96S44 253 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
DDX56-209ENST00000473924 NUDT19A8MXV4 375 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 UPK2O00526 184 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 PLXNB1O43157 2135 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 SNAPC5O75971 98 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 ATG12O94817 140 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 RPLP1P05386 114 aaKnown RBP9.72□□□□□ -0.85
DDX56-209ENST00000473924 APELAP0DMC3 54 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 AKR1C4P17516 323 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 RPL27AP46776 148 aaKnown RBP9.72□□□□□ -0.85
DDX56-209ENST00000473924 ZNF846Q147U1 533 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 C10orf55Q5SWW7 151 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 LCNL1Q6ZST4 164 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 H2BFWTQ7Z2G1 175 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 TMED4Q7Z7H5 227 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 OR5M8Q8NGP6 311 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 TMEM68Q96MH6 324 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 FYTTD1Q96QD9 318 aaKnown RBP9.72□□□□□ -0.85
DDX56-209ENST00000473924 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
DDX56-209ENST00000473924 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
DDX56-209ENST00000473924 CCDC32Q9BV29 185 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 WDR12Q9GZL7 423 aaKnown RBP9.72□□□□□ -0.85
DDX56-209ENST00000473924 COMMD5Q9GZQ3 224 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 NAA60Q9H7X0 242 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 ZFP57Q9NU63 452 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 VSIG4Q9Y279 399 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 KCNIP3Q9Y2W7 256 aa9.72□□□□□ -0.85
DDX56-209ENST00000473924 TRAV3A0A0B4J244 114 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 CRYM-AS1A6NIL9 109 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 TSPAN15O95858 294 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 IGLV1-40P01703 118 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 OR5AC1P0C628 307 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 HLA-GP17693 338 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 PSMB8P28062 276 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 AKR1C2P52895 323 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.86
DDX56-209ENST00000473924 RBMS2Q15434 407 aaKnown RBP9.71□□□□□ -0.86
DDX56-209ENST00000473924 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
DDX56-209ENST00000473924 ADAD2Q8NCV1 583 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms