RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 RPLP1P05386 114 aaKnown RBP14.07□□□□□ -0.16
SNX4-204ENST00000473417 ELANEP08246 267 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 PI3P19957 117 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 S100GP29377 79 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 PPIFP30405 207 aaKnown RBP14.07□□□□□ -0.16
SNX4-204ENST00000473417 HOXD3P31249 432 aaPredicted RBP14.07□□□□□ -0.16
SNX4-204ENST00000473417 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
SNX4-204ENST00000473417 FOXE3Q13461 319 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 TNXAQ16473 311 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 CXorf66Q5JRM2 361 aaPredicted RBP14.07□□□□□ -0.16
SNX4-204ENST00000473417 SPANXN2Q5MJ10 180 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 UNQ5815/PRO19632Q6UWF5 114 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 Q8N402 240 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 LFNGQ8NES3 379 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 TERB2Q8NHR7 220 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 RHOVQ96L33 236 aa14.07□□□□□ -0.16
SNX4-204ENST00000473417 A0A1W2PN81 502 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 OR2A4O95047 310 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 F2RP25116 425 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 CHRNA7P36544 502 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 ETV6P41212 452 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 CRIP2P52943 208 aaPredicted RBP14.06□□□□□ -0.16
SNX4-204ENST00000473417 TBC1D26Q86UD7 250 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 MINDY2Q8NBR6 621 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 VSTM2AQ8TAG5 236 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 CD300LFQ8TDQ1 290 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 DPF1Q92782 380 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 RAX2Q96IS3 184 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 OR2A7Q96R45 310 aa14.06□□□□□ -0.16
SNX4-204ENST00000473417 MCRIP2Q9BUT9 160 aaKnown RBP14.06□□□□□ -0.16
SNX4-204ENST00000473417 ZNF430Q9H8G1 570 aaPredicted RBP14.06□□□□□ -0.16
SNX4-204ENST00000473417 WI2-2373I1.2A0A1W2PRP0 233 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 A6NHS1 94 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 S1PR2O95136 353 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 PTBP1P26599 531 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■■■ 28.3
SNX4-204ENST00000473417 LPAR6P43657 344 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 CDX1P47902 265 aaPredicted RBP14.05□□□□□ -0.16
SNX4-204ENST00000473417 TAS2R31P59538 309 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 C19orf54Q5BKX5 351 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 PUSL1Q8N0Z8 303 aaKnown RBP14.05□□□□□ -0.16
SNX4-204ENST00000473417 MARCH1Q8TCQ1 289 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 CASTOR1Q8WTX7 329 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 DUX3Q96PT4 197 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 KLK15Q9H2R5 256 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 PLEKHA2Q9HB19 425 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 SLC2A9Q9NRM0 540 aa14.05□□□□□ -0.16
SNX4-204ENST00000473417 DNAH9Q9NYC9 4486 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 CCL24O00175 119 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 SOX15O60248 233 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 CREBL2O60519 120 aaPredicted RBP14.04□□□□□ -0.16
SNX4-204ENST00000473417 ACTL6BO94805 426 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 KBTBD11O94819 623 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 IGLV1-40P01703 118 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 RPA2P15927 270 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 PSMB8P28062 276 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 ZNF585BQ52M93 769 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 AKIRIN2Q53H80 203 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 TMEM65Q6PI78 240 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 MMD2Q8IY49 270 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 TCTEX1D1Q8N7M0 179 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 OR51S1Q8NGJ8 323 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 OR13C8Q8NGS7 320 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 TMEM167AQ8TBQ9 72 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 TRIM63Q969Q1 353 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 MRGPRFQ96AM1 343 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 PHB2Q99623 299 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 AIFM2Q9BRQ8 373 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 SRRQ9GZT4 340 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 HRASLSQ9HDD0 168 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 MCUBQ9NWR8 336 aa14.04□□□□□ -0.16
SNX4-204ENST00000473417 FOXA2Q9Y261 457 aaPredicted RBP14.04□□□□□ -0.16
SNX4-204ENST00000473417 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 MPPED1O15442 326 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 APELAP0DMC3 54 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 NQO2P16083 231 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 PIGPP57054 158 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 DEFB136Q30KP8 78 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 C10orf55Q5SWW7 151 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 OR4A47Q6IF82 309 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 TOMM5Q8N4H5 51 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 DMBX1Q8NFW5 382 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 OR5T1Q8NG75 326 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 ZFAND1Q8TCF1 268 aa14.03□□□□□ -0.16
SNX4-204ENST00000473417 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
SNX4-204ENST00000473417 ZNF486Q96H40 463 aaPredicted RBP14.03□□□□□ -0.16
SNX4-204ENST00000473417 RAB9AP51151 201 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 RND3P61587 244 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 KLF9Q13886 244 aaPredicted RBP14.02□□□□□ -0.17
SNX4-204ENST00000473417 MYOZ3Q8TDC0 251 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 MS4A10Q96PG2 267 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 PRRT1Q99946 306 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 TMEM140Q9NV12 185 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 BET1LQ9NYM9 111 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 COMMD9Q9P000 198 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 COPZ2Q9P299 210 aa14.02□□□□□ -0.17
SNX4-204ENST00000473417 TRAV3A0A0B4J244 114 aa14.01□□□□□ -0.17
SNX4-204ENST00000473417 KRASP01116 189 aa14.01□□□□□ -0.17
SNX4-204ENST00000473417 CTSDP07339 412 aaPredicted RBP14.01□□□□□ -0.17
SNX4-204ENST00000473417 MYOD1P15172 320 aa14.01□□□□□ -0.17
SNX4-204ENST00000473417 ECI1P42126 302 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms