RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-226	ENST00000473066	SULT1C2	O00338	296 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	HPGDS	O60760	199 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	BRI3	O95415	125 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	DEFA5	Q01523	94 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	DYRK1A	Q13627	763 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	MRGPRG-AS1	Q2M3A8	158 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	C10orf55	Q5SWW7	151 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	ADAD2	Q8NCV1	583 aa	Known RBP	12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	OR6Q1	Q8NGQ2	317 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	CD300LF	Q8TDQ1	290 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	FYTTD1	Q96QD9	318 aa	Known RBP	12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	HRASLS	Q9HDD0	168 aa		12.03	□□□□□ -0.48
MRPL55-226	ENST00000473066	FAM223B	A6NKX1	122 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	NAT1	P18440	290 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	S100G	P29377	79 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	RCVRN	P35243	200 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	HRH1	P35367	487 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	RFX2	P48378	723 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	ERVK-16	P61578	105 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	TSPAN5	P62079	268 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	RPL8	P62917	257 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	ZNF818P	Q6ZRF7	136 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	FAM223A	Q8IWN6	122 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	CMTM1	Q8IZ96	169 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	PUSL1	Q8N0Z8	303 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	OR6F1	Q8NGZ6	308 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	OR4A5	Q8NH83	315 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	MOB3A	Q96BX8	217 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	NAA50	Q9GZZ1	169 aa	Known RBP	12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	SCOC	Q9UIL1	159 aa		12.02	□□□□□ -0.49
MRPL55-226	ENST00000473066	DHFR	P00374	187 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	HPRT1	P00492	218 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	NQO2	P16083	231 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	ZNF182	P17025	639 aa	Predicted RBP	12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	ELK1	P19419	428 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	HLA-DMA	P28067	261 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	TAS2R31	P59538	309 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	RHOG	P84095	191 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	EXOSC2	Q13868	293 aa	Known RBP	12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	CTF1	Q16619	201 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	OR4A47	Q6IF82	309 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	ACSM6	Q6P461	480 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	DMBX1	Q8NFW5	382 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	GPX8	Q8TED1	209 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	B9D2	Q9BPU9	175 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	RSRP1	Q9BUV0	290 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	BET1L	Q9NYM9	111 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	COMMD9	Q9P000	198 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	PEF1	Q9UBV8	284 aa	Known RBP	12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	ZNF257	Q9Y2Q1	563 aa		12.01	□□□□□ -0.49
MRPL55-226	ENST00000473066	NOL3	O60936	208 aa	Known RBP	12	□□□□□ -0.49
MRPL55-226	ENST00000473066	RLN1	P04808	185 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	HLA-G	P17693	338 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	ATP5G2	Q06055	141 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	TATDN3	Q17R31	274 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	RPEL1	Q2QD12	228 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	FAM209B	Q5JX69	171 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	ZNF343	Q6P1L6	599 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	DHRS11	Q6UWP2	260 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	TTC9C	Q8N5M4	171 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	FXYD6	Q9H0Q3	95 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	ADAM30	Q9UKF2	790 aa		12	□□□□□ -0.49
MRPL55-226	ENST00000473066	HMX3	A6NHT5	357 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	GPR31	O00270	319 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	S1PR2	O95136	353 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	PRH1	P02810	166 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	BRWD1-AS2	P59051	145 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	RNASE12	Q5GAN4	147 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	LPCAT3	Q6P1A2	487 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	NECAP1	Q8NC96	275 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	C15orf40	Q8WUR7	153 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	COMMD5	Q9GZQ3	224 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	PLEKHA2	Q9HB19	425 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	AKIP1	Q9NQ31	210 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	EXTL2	Q9UBQ6	330 aa		11.99	□□□□□ -0.49
MRPL55-226	ENST00000473066	NPIPB5	A8MRT5	1133 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	TEX22	C9J3V5	150 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	RGS5	O15539	181 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	OR2J3	O76001	311 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	ZNF735	P0CB33	412 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	F2R	P25116	425 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	GNRHR	P30968	328 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	ALDH3B2	P48448	385 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	POU2AF1	Q16633	256 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	SLC2A9	Q9NRM0	540 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	TMEM140	Q9NV12	185 aa		11.98	□□□□□ -0.49
MRPL55-226	ENST00000473066	IFNA6	P05013	189 aa		11.97	□□□□□ -0.49
MRPL55-226	ENST00000473066	DEFA4	P12838	97 aa		11.97	□□□□□ -0.49
MRPL55-226	ENST00000473066	SYNJ2BP	P57105	145 aa		11.97	□□□□□ -0.49
MRPL55-226	ENST00000473066	TRBV9	A0A0B4J1U6	114 aa		11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	UPK2	O00526	184 aa		11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	CYB5B	O43169	146 aa		11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	PGLYRP1	O75594	196 aa	Predicted RBP	11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	IL6R	P08887	468 aa	Predicted RBP	11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	RPA2	P15927	270 aa		11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	SPN	P16150	400 aa		11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	HIST1H1B	P16401	226 aa	Known RBP	11.96	□□□□□ -0.49
MRPL55-226	ENST00000473066	PSMB6	P28072	239 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms