RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TCTEX1D4Q5JR98 221 aa16.32■□□□□ 0.2
TOP3A-204ENST00000472959 NDUFA11Q86Y39 141 aa16.32■□□□□ 0.2
TOP3A-204ENST00000472959 CADM3Q8N126 398 aa16.32■□□□□ 0.2
TOP3A-204ENST00000472959 TMEM167AQ8TBQ9 72 aa16.32■□□□□ 0.2
TOP3A-204ENST00000472959 ZNF430Q9H8G1 570 aaPredicted RBP16.32■□□□□ 0.2
TOP3A-204ENST00000472959 BET1LQ9NYM9 111 aa16.32■□□□□ 0.2
TOP3A-204ENST00000472959 FBXO7Q9Y3I1 522 aa16.32■□□□□ 0.2
TOP3A-204ENST00000472959 TCRBV4S1A1TA0A5B7 111 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 G3V318 75 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 H0Y980 276 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 IGHG4P01861 327 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 ELANEP08246 267 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 PPIFP30405 207 aaKnown RBP16.31■□□□□ 0.2
TOP3A-204ENST00000472959 MAS1LP35410 378 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 SSBP2P81877 361 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-204ENST00000472959 FOXE3Q13461 319 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 OR4A47Q6IF82 309 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 SSX9Q7RTT3 188 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 MINDY2Q8NBR6 621 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 DMBX1Q8NFW5 382 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 GRPEL2Q8TAA5 225 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 R3HDM4Q96D70 268 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 TMEM68Q96MH6 324 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 RTBDNQ9BSG5 229 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-204ENST00000472959 C5orf66Q9H5L9 145 aa16.31■□□□□ 0.2
TOP3A-204ENST00000472959 TSSC4Q9Y5U2 329 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-204ENST00000472959 NAP1L6A6NFF2 107 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 SERPINE2P07093 398 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 IL7P13232 177 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 RPA2P15927 270 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 TNXAQ16473 311 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 C2orf68Q2NKX9 166 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 C19orf54Q5BKX5 351 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 RNF152Q8N8N0 203 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 CCDC32Q9BV29 185 aa16.3■□□□□ 0.2
TOP3A-204ENST00000472959 C3orf85A0A1B0GTC6 90 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 MARCH11A6NNE9 402 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 IL6RP08887 468 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 FGF2P09038 288 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 RPL8P62917 257 aaKnown RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 ECSCRQ19T08 205 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 CXorf66Q5JRM2 361 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 UNQ5815/PRO19632Q6UWF5 114 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 LFNGQ8NES3 379 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 SLC25A21Q9BQT8 299 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 C7orf50Q9BRJ6 194 aaKnown RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 FAM103A1Q9BTL3 118 aaKnown RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 ZFP57Q9NU63 452 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 TMEM140Q9NV12 185 aa16.29■□□□□ 0.2
TOP3A-204ENST00000472959 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-204ENST00000472959 TEX13DA0A0J9YY54 714 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-204ENST00000472959 CENPXA8MT69 81 aa16.28■□□□□ 0.2
TOP3A-204ENST00000472959 KRASP01116 189 aa16.28■□□□□ 0.2
TOP3A-204ENST00000472959 IGLV1-40P01703 118 aa16.28■□□□□ 0.2
TOP3A-204ENST00000472959 OR5M8Q8NGP6 311 aa16.28■□□□□ 0.2
TOP3A-204ENST00000472959 SRSF12Q8WXF0 261 aaKnown RBP16.28■□□□□ 0.2
TOP3A-204ENST00000472959 SPIN2AQ99865 258 aa16.28■□□□□ 0.2
TOP3A-204ENST00000472959 SPIN2BQ9BPZ2 258 aa16.28■□□□□ 0.2
TOP3A-204ENST00000472959 MSGN1A6NI15 193 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 UPK2O00526 184 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 PSMB8P28062 276 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 CD40LGP29965 261 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 PRR31Q5SQ13 230 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 HIST2H2BDQ6DRA6 164 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 TMEM65Q6PI78 240 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 TP53RKQ96S44 253 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 WDR12Q9GZL7 423 aaKnown RBP16.27■□□□□ 0.2
TOP3A-204ENST00000472959 NAA60Q9H7X0 242 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 VSIG4Q9Y279 399 aa16.27■□□□□ 0.2
TOP3A-204ENST00000472959 A0A1W2PN81 502 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 CRYM-AS1A6NIL9 109 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 ADARB2-AS1A8MUL3 147 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 ATG12O94817 140 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 HLA-GP17693 338 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 G6PCP35575 357 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 CHRNA7P36544 502 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 NSUN5P1Q3KNT7 163 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 KHDC1LQ5JSQ8 128 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 SGPP2Q8IWX5 399 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 PHB2Q99623 299 aa16.26■□□□□ 0.19
TOP3A-204ENST00000472959 PLXNB1O43157 2135 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 UCP1P25874 307 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 RPL23AP62750 156 aaKnown RBP16.25■□□□□ 0.19
TOP3A-204ENST00000472959 ZNF846Q147U1 533 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 SP6Q3SY56 376 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 SEC22AQ96IW7 307 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 TSC22D3Q99576 134 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 TMEM222Q9H0R3 208 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 KCNIP3Q9Y2W7 256 aa16.25■□□□□ 0.19
TOP3A-204ENST00000472959 LINC00854A0A1B0GVQ3 168 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 SOX15O60248 233 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 SNAPC5O75971 98 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 IGKV1-39P01597 117 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 IGKV1D-39P04432 117 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 RPLP1P05386 114 aaKnown RBP16.24■□□□□ 0.19
TOP3A-204ENST00000472959 PF4V1P10720 104 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 SLC6A1P30531 599 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 RPL27AP46776 148 aaKnown RBP16.24■□□□□ 0.19
TOP3A-204ENST00000472959 DHODHQ02127 395 aa16.24■□□□□ 0.19
TOP3A-204ENST00000472959 RBMS2Q15434 407 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms