RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, human

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIK3-208	ENST00000472648	IGKV1-16	P04430	117 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	CD1A	P06126	327 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	C8orf88	P0DMB2	117 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	RCC1	P18754	421 aa	Predicted RBP	4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	GAL	P22466	123 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	MYL9	P24844	172 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	CALR	P27797	417 aa	Known RBP	4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	BDKRB2	P30411	391 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	ELL	P55199	621 aa	Predicted RBP	4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	CMC4	P56277	68 aa	Predicted RBP	4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	IRF3	Q14653	427 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	TIMM50	Q3ZCQ8	353 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	LY6G6F	Q5SQ64	297 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	UBE2U	Q5VVX9	321 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	DMKN	Q6E0U4	476 aa	Predicted RBP	4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	CLEC19A	Q6UXS0	136 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	GPR141	Q7Z602	305 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	C5orf24	Q7Z6I8	188 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	PDPN	Q86YL7	162 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	JAGN1	Q8N5M9	183 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	C15orf53	Q8NAA6	179 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	OR5AN1	Q8NGI8	311 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	OR51A4	Q8NGJ6	313 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	FAM210B	Q96KR6	192 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	OR14A2	Q96R54	314 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	TAS2R4	Q9NYW5	299 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	LSM2	Q9Y333	95 aa	Known RBP	4.19	□□□□□ -1.74
SIK3-208	ENST00000472648	UFC1	Q9Y3C8	167 aa		4.19	□□□□□ -1.74
SIK3-208	ENST00000472648		A0A1B0GW64	132 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	FAM90A7P	A6NKC0	464 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	MCRIP1	C9JLW8	97 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	LALBA	P00709	142 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	CD36	P16671	472 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	SRM	P19623	302 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	SERPINA2	P20848	420 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	PSMD7	P51665	324 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	RPS25	P62851	125 aa	Known RBP	4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	TPBG	Q13641	420 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	TNXA	Q16473	311 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	TMEM41B	Q5BJD5	291 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	NHLRC3	Q5JS37	347 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	DDI2	Q5TDH0	399 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	XAF1	Q6GPH4	301 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	UNQ9165/PRO28630	Q6UXU0	137 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	SRSF12	Q8WXF0	261 aa	Known RBP	4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	ACOT12	Q8WYK0	555 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	PHYHIP	Q92561	330 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	EEF1AKMT3	Q96AZ1	226 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	GALM	Q96C23	342 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	HARBI1	Q96MB7	349 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	PLGRKT	Q9HBL7	147 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	SPACA1	Q9HBV2	294 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	TMEM138	Q9NPI0	162 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	NDUFB11	Q9NX14	153 aa		4.18	□□□□□ -1.74
SIK3-208	ENST00000472648	TRDV1	A0A1B0GX56	115 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	GPX5	O75715	221 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	CDRT1	O95170	752 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	CTSD	P07339	412 aa	Predicted RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	BTF3	P20290	206 aa	Known RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF93	P35789	620 aa	Predicted RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	RPL5	P46777	297 aa	Known RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	TFPI2	P48307	235 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	LSM3	P62310	102 aa	Known RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	CBX3	Q13185	183 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	GPR176	Q14439	515 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ICAM4	Q14773	271 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	SLC22A6	Q4U2R8	563 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	C22orf42	Q6IC83	251 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF529	Q6P280	563 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	MORN3	Q6PF18	240 aa	Predicted RBP	4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF554	Q86TJ5	538 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	SLC25A42	Q86VD7	318 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	PARP16	Q8N5Y8	322 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	NKAIN3	Q8N8D7	197 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF485	Q8NCK3	441 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	IL1F10	Q8WWZ1	152 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	MUL1	Q969V5	352 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ABHD14B	Q96IU4	210 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	PGLYRP3	Q96LB9	341 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	DERL3	Q96Q80	235 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	SPIN2A	Q99865	258 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	SPIN2B	Q9BPZ2	258 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	METTL9	Q9H1A3	318 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ABRACL	Q9P1F3	81 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	TBC1D24	Q9ULP9	559 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF257	Q9Y2Q1	563 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648		S4R3C0	116 aa		4.17	□□□□□ -1.74
SIK3-208	ENST00000472648	IGHV3-35	A0A0C4DH35	117 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	TRBV5-5	A0A0J9YX44	114 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	DPPA5	A6NC42	116 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	ZNF780A	O75290	641 aa	Predicted RBP	4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	CA11	O75493	328 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	ACTL6B	O94805	426 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	IFNA5	P01569	189 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	IGLV2-23	P01705	113 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	CRYGB	P07316	175 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	HTN3	P15516	51 aa		4.16	□□□□□ -1.74
SIK3-208	ENST00000472648	RAB3B	P20337	219 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms