RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 MRPS16Q9Y3D3 137 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 FLVCR1Q9Y5Y0 555 aa2.54□□□□□ -2
TTC3-214ENST00000472398 V9GY05 133 aa2.54□□□□□ -2
TTC3-214ENST00000472398 INO80Q9ULG1 1556 aaPredicted RBP2.54□□□□□ -2
TTC3-214ENST00000472398 BRCA1P38398 1863 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 PTPRFP10586 1907 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ZSWIM8A7E2V4 1837 aa2.54□□□□□ -2
TTC3-214ENST00000472398 TRAV8-6A0A0B4J262 113 aa2.54□□□□□ -2
TTC3-214ENST00000472398 IGLC7A0M8Q6 106 aa2.54□□□□□ -2
TTC3-214ENST00000472398 C4orf51C9J302 202 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ISLRO14498 428 aa2.54□□□□□ -2
TTC3-214ENST00000472398 MYL12BO14950 172 aa2.54□□□□□ -2
TTC3-214ENST00000472398 GSTZ1O43708 216 aaPredicted RBP2.54□□□□□ -2
TTC3-214ENST00000472398 TYROBPO43914 113 aa2.54□□□□□ -2
TTC3-214ENST00000472398 CA2P00918 260 aa2.54□□□□□ -2
TTC3-214ENST00000472398 HIST1H1DP16402 221 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 CRYBB3P26998 211 aa2.54□□□□□ -2
TTC3-214ENST00000472398 CRISP3P54108 245 aa2.54□□□□□ -2
TTC3-214ENST00000472398 SEC61BP60468 96 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 CRADDP78560 199 aa2.54□□□□□ -2
TTC3-214ENST00000472398 TGIF1Q15583 401 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ZNF773Q6PK81 442 aa2.54□□□□□ -2
TTC3-214ENST00000472398 HEPN1Q6WQI6 88 aa2.54□□□□□ -2
TTC3-214ENST00000472398 Q6ZN92 141 aa2.54□□□□□ -2
TTC3-214ENST00000472398 CLEC20AQ6ZU45 233 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ZNF571Q7Z3V5 609 aaPredicted RBP2.54□□□□□ -2
TTC3-214ENST00000472398 WDR86Q86TI4 376 aa2.54□□□□□ -2
TTC3-214ENST00000472398 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
TTC3-214ENST00000472398 RFLNBQ8N5W9 214 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ZNRF1Q8ND25 227 aa2.54□□□□□ -2
TTC3-214ENST00000472398 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
TTC3-214ENST00000472398 OR4K13Q8NH42 304 aa2.54□□□□□ -2
TTC3-214ENST00000472398 BRK1Q8WUW1 75 aa2.54□□□□□ -2
TTC3-214ENST00000472398 LRRC29Q8WV35 223 aa2.54□□□□□ -2
TTC3-214ENST00000472398 PSMF1Q92530 271 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ELSPBP1Q96BH3 223 aa2.54□□□□□ -2
TTC3-214ENST00000472398 TM2D3Q9BRN9 247 aa2.54□□□□□ -2
TTC3-214ENST00000472398 AICDAQ9GZX7 198 aa2.54□□□□□ -2
TTC3-214ENST00000472398 C11orf68Q9H3H3 251 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 C16orf95Q9H693 158 aa2.54□□□□□ -2
TTC3-214ENST00000472398 GNB4Q9HAV0 340 aa2.54□□□□□ -2
TTC3-214ENST00000472398 VSIG4Q9Y279 399 aa2.54□□□□□ -2
TTC3-214ENST00000472398 KLF13Q9Y2Y9 288 aaPredicted RBP2.54□□□□□ -2
TTC3-214ENST00000472398 MYH4Q9Y623 1939 aa2.54□□□□□ -2
TTC3-214ENST00000472398 ZC3H13Q5T200 1668 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 MICAL3Q7RTP6 2002 aa2.54□□□□□ -2
TTC3-214ENST00000472398 FER1L5A0AVI2 2057 aa2.54□□□□□ -2
TTC3-214ENST00000472398 MYO18AQ92614 2054 aaKnown RBP2.54□□□□□ -2
TTC3-214ENST00000472398 CHD4Q14839 1912 aa2.54□□□□□ -2
TTC3-214ENST00000472398 C5orf49A4QMS7 147 aa2.53□□□□□ -2
TTC3-214ENST00000472398 A6NDN8 102 aa2.53□□□□□ -2
TTC3-214ENST00000472398 EPOPA6NHQ4 379 aa2.53□□□□□ -2
TTC3-214ENST00000472398 RER1O15258 196 aa2.53□□□□□ -2
TTC3-214ENST00000472398 FOXS1O43638 330 aa2.53□□□□□ -2
TTC3-214ENST00000472398 PITX3O75364 302 aa2.53□□□□□ -2
TTC3-214ENST00000472398 LYZL6O75951 148 aa2.53□□□□□ -2
TTC3-214ENST00000472398 UBL3O95164 117 aa2.53□□□□□ -2
TTC3-214ENST00000472398 CGAP01215 116 aa2.53□□□□□ -2
TTC3-214ENST00000472398 TNFP01375 233 aa2.53□□□□□ -2
TTC3-214ENST00000472398 SLC25A6P12236 298 aa2.53□□□□□ -2
TTC3-214ENST00000472398 CRISP2P16562 243 aa2.53□□□□□ -2
TTC3-214ENST00000472398 CR2P20023 1033 aa2.53□□□□□ -2
TTC3-214ENST00000472398 RPS4Y1P22090 263 aaKnown RBP2.53□□□□□ -2
TTC3-214ENST00000472398 SRP14P37108 136 aaKnown RBP2.53□□□□□ -2
TTC3-214ENST00000472398 HINT1P49773 126 aaPredicted RBP2.53□□□□□ -2
TTC3-214ENST00000472398 KLRD1Q13241 179 aa2.53□□□□□ -2
TTC3-214ENST00000472398 SRSF9Q13242 221 aaKnown RBP eCLIP2.53□□□□□ -2
TTC3-214ENST00000472398 SSX8Q7RTT4 187 aa2.53□□□□□ -2
TTC3-214ENST00000472398 TMEM183AQ8IXX5 376 aa2.53□□□□□ -2
TTC3-214ENST00000472398 ATOH7Q8N100 152 aa2.53□□□□□ -2
TTC3-214ENST00000472398 METTL27Q8N6F8 245 aaPredicted RBP2.53□□□□□ -2
TTC3-214ENST00000472398 ZIC4Q8N9L1 334 aa2.53□□□□□ -2
TTC3-214ENST00000472398 ZNF114Q8NC26 417 aa2.53□□□□□ -2
TTC3-214ENST00000472398 OSR1Q8TAX0 266 aaPredicted RBP2.53□□□□□ -2
TTC3-214ENST00000472398 FGF14Q92915 247 aa2.53□□□□□ -2
TTC3-214ENST00000472398 RNF185Q96GF1 192 aa2.53□□□□□ -2
TTC3-214ENST00000472398 MED28Q9H204 178 aa2.53□□□□□ -2
TTC3-214ENST00000472398 HEBP1Q9NRV9 189 aa2.53□□□□□ -2
TTC3-214ENST00000472398 FUT9Q9Y231 359 aa2.53□□□□□ -2
TTC3-214ENST00000472398 CHD2O14647 1828 aaKnown RBP2.53□□□□□ -2
TTC3-214ENST00000472398 SCRG1O75711 98 aa2.53□□□□□ -2
TTC3-214ENST00000472398 P0DMU3 169 aa2.53□□□□□ -2
TTC3-214ENST00000472398 FAM231AP0DMU4 169 aa2.53□□□□□ -2
TTC3-214ENST00000472398 FAM231CP0DMU5 169 aa2.53□□□□□ -2
TTC3-214ENST00000472398 CA6P23280 308 aa2.53□□□□□ -2
TTC3-214ENST00000472398 ZNF93P35789 620 aaPredicted RBP2.53□□□□□ -2
TTC3-214ENST00000472398 OPRK1P41145 380 aa2.53□□□□□ -2
TTC3-214ENST00000472398 VDAC2P45880 294 aaPredicted RBP2.53□□□□□ -2
TTC3-214ENST00000472398 NUDT2P50583 147 aa2.53□□□□□ -2
TTC3-214ENST00000472398 YPEL3P61236 119 aaPredicted RBP2.53□□□□□ -2
TTC3-214ENST00000472398 RPS11P62280 158 aaKnown RBP eCLIP2.53□□□□□ -2
TTC3-214ENST00000472398 FOXF1Q12946 379 aa2.53□□□□□ -2
TTC3-214ENST00000472398 RTL8BQ17RB0 113 aa2.53□□□□□ -2
TTC3-214ENST00000472398 VMA21Q3ZAQ7 101 aa2.53□□□□□ -2
TTC3-214ENST00000472398 ZNF260Q3ZCT1 412 aa2.53□□□□□ -2
TTC3-214ENST00000472398 SPANXN3Q5MJ09 141 aa2.53□□□□□ -2
TTC3-214ENST00000472398 AADACL3Q5VUY0 350 aa2.53□□□□□ -2
TTC3-214ENST00000472398 TMEM236Q5W0B7 351 aa2.53□□□□□ -2
TTC3-214ENST00000472398 TEX43Q6ZNM6 134 aa2.53□□□□□ -2
TTC3-214ENST00000472398 PRNTQ86SH4 94 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms