RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CXCL12P48061 93 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 POLR2HP52434 150 aaKnown RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 RPS25P62851 125 aaKnown RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 GNGT1P63211 74 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 MEF2CQ06413 473 aaPredicted RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 FABP9Q0Z7S8 132 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 ZNF846Q147U1 533 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 PAFAH1B3Q15102 231 aaKnown RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 ZNF726P1Q15940 193 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 NRF1Q16656 503 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 CCL15Q16663 113 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 KRTAP13-2Q52LG2 175 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 ZNF550Q7Z398 422 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 OR1N2Q8NGR9 330 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 JOSD2Q8TAC2 188 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 ZNF420Q8TAQ5 688 aaPredicted RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 S100ZQ8WXG8 99 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 GPR146Q96CH1 333 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 MALSU1Q96EH3 234 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 FMC1Q96HJ9 113 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 OR52B2Q96RD2 323 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 MRPL45Q9BRJ2 306 aaKnown RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 PBOV1Q9GZY1 135 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 FAM49BQ9NUQ9 324 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 DNAJC27Q9NZQ0 273 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 TMEM216Q9P0N5 145 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 REREQ9P2R6 1566 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 NAT8Q9UHE5 227 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 BOKQ9UMX3 212 aaPredicted RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 PKIGQ9Y2B9 76 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 ADGBQ8N7X0 1667 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 TOP2AP11388 1531 aaKnown RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 NCKAP5O14513 1909 aa2.21□□□□□ -2.06
CD46-213ENST00000471987 BAZ2AQ9UIF9 1905 aaKnown RBP2.21□□□□□ -2.06
CD46-213ENST00000471987 PZPP20742 1482 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 MYOM2P54296 1465 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 DENND4AQ7Z401 1863 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 CUL9Q8IWT3 2517 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TNS2Q63HR2 1409 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 CHD2O14647 1828 aaKnown RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 ITGB4P16144 1822 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 IGLV3-22A0A075B6J6 115 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TRAV8-4A0A0B4J246 113 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 A0A0G2JN53 185 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 DUXBA0A1W2PPF3 345 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 MYBPHLA2RUH7 354 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 RBFOX3A6NFN3 312 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 NCBP2LA6PVI3 153 aaKnown RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 LINC01619G3V211 115 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 J3QR89 54 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 SULT2B1O00204 365 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 REM1O75628 298 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 SNAPC5O75971 98 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 AIFM1O95831 613 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 PTHP01270 115 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 P01737 135 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 IGHMP01871 453 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 SERPINE1P05121 402 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 CSN2P05814 226 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 PGA4P0DJD7 388 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 PGA3P0DJD8 388 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 PGA5P0DJD9 388 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 CXCL3P19876 107 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 CSRP1P21291 193 aaKnown RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 PRTN3P24158 256 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 AGTR1P30556 359 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 GABRA3P34903 492 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 GPR6P46095 362 aaPredicted RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 CTBP2P56545 445 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 H2BFSP57053 126 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 C1QTNF8P60827 252 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 IFITM3Q01628 133 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 PRDX1Q06830 199 aaKnown RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 CCSMST1Q4G0I0 132 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TMEM255AQ5JRV8 349 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 FAM201AQ5SY85 155 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 GLYATL3Q5SZD4 288 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR2T5Q6IEZ7 315 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 RPL22L1Q6P5R6 122 aaKnown RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 GTF2H5Q6ZYL4 71 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 C20orf196Q8IYI0 205 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TCTE3Q8IZS6 198 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TMEM86AQ8N2M4 240 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 DEFB125Q8N687 156 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TMEM229BQ8NBD8 167 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR4M1Q8NGD0 313 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR4K5Q8NGD3 323 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR2T29Q8NH02 315 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 CT55Q8WUE5 264 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 BLNKQ8WV28 456 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 PP6455Q8WZ26 134 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TMEM54Q969K7 222 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 DERL3Q96Q80 235 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 TRIB3Q96RU7 358 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 MRPL57Q9BQC6 102 aaKnown RBP2.2□□□□□ -2.06
CD46-213ENST00000471987 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR2H1Q9GZK4 316 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR2J1Q9GZK6 312 aa2.2□□□□□ -2.06
CD46-213ENST00000471987 OR8D2Q9GZM6 311 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms