RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 VKORC1L1Q8N0U8 176 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 ZNF383Q8NA42 475 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 CA5BP1Q8WTZ4 195 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 ISOC2Q96AB3 205 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 RHOVQ96L33 236 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 FOXA2Q9Y261 457 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-205ENST00000471582 ICE1Q9Y2F5 2266 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 A0A1W2PPE3 182 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 A0A1W2PPH5 198 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 CD1BP29016 333 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 FFAR4Q5NUL3 377 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 ADAM5Q6NVV9 412 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 OR10G9Q8NGN4 311 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 OR10G7Q8NGN6 311 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 HEYLQ9NQ87 328 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-205ENST00000471582 SLC25A10Q9UBX3 287 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-205ENST00000471582 DOCK11Q5JSL3 2073 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 A0A1W2PPE2 198 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 C1orf196B1AJZ1 125 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 B4DEV8 164 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 TMEM178BH3BS89 294 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 IFNA10P01566 189 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 RAB11AP62491 216 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 DLK1P80370 383 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 PNRC1Q12796 327 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-205ENST00000471582 MALSU1Q96EH3 234 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 WFIKKN1Q96NZ8 548 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 ACTR3CQ9C0K3 210 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-205ENST00000471582 TMEM14BQ9NUH8 114 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 TCF19Q9Y242 345 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 PCNX1Q96RV3 2341 aa15.28■□□□□ 0.04
COL20A1-205ENST00000471582 OR2C1O95371 312 aa15.27■□□□□ 0.04
COL20A1-205ENST00000471582 HRASP01112 189 aa15.27■□□□□ 0.04
COL20A1-205ENST00000471582 NDUFB7P17568 137 aa15.27■□□□□ 0.04
COL20A1-205ENST00000471582 RAB5AP20339 215 aa15.27■□□□□ 0.04
COL20A1-205ENST00000471582 HABP2Q14520 560 aaPredicted RBP15.27■□□□□ 0.04
COL20A1-205ENST00000471582 YPEL4Q96NS1 127 aa15.27■□□□□ 0.04
COL20A1-205ENST00000471582 SAV1Q9H4B6 383 aaPredicted RBP15.27■□□□□ 0.04
COL20A1-205ENST00000471582 SIRT7Q9NRC8 400 aa15.27■□□□□ 0.04
COL20A1-205ENST00000471582 PPIAL4EA0A075B759 164 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 TRAV3A0A0B4J244 114 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 CXorf65A6NEN9 183 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 PRSS46E5RG02 174 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 PPIAL4DF5H284 164 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 MMP23AO75900 390 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 PPIAL4FP0DN26 164 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 LY6DQ14210 128 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 OR4A47Q6IF82 309 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 RNASE6Q93091 150 aaKnown RBP15.27■□□□□ 0.03
COL20A1-205ENST00000471582 PPIAL4AQ9Y536 164 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 ATRXP46100 2492 aa15.27■□□□□ 0.03
COL20A1-205ENST00000471582 SHISA9B4DS77 424 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 AGAP20933 346 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 GNG10P50151 68 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 RPS16P62249 146 aaKnown RBP15.26■□□□□ 0.03
COL20A1-205ENST00000471582 RPL31P62899 125 aaKnown RBP15.26■□□□□ 0.03
COL20A1-205ENST00000471582 ACOT6Q3I5F7 207 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-205ENST00000471582 NCMAPQ5T1S8 102 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 FAM24BQ8N5W8 94 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 Q8N7P7 452 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 SLC25A22Q9H936 323 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 MANBALQ9NQG1 85 aa15.26■□□□□ 0.03
COL20A1-205ENST00000471582 CCL21O00585 134 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 CYB5BO43169 146 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 CHRNB4P30926 498 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 HOXA1P49639 335 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 HSPE1P61604 102 aaKnown RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 MEF2BQ02080 365 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 RTL8BQ17RB0 113 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 HEPN1Q6WQI6 88 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 DMRTC2Q8IXT2 367 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 ZCCHC24Q8N2G6 241 aaKnown RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 TMEM106BQ9NUM4 274 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 PRELID1Q9Y255 219 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 SMG1Q96Q15 3661 aaKnown RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 SEC14L6B5MCN3 397 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 RRHO14718 337 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 TNFRSF13BO14836 293 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-205ENST00000471582 HNF4GQ14541 408 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 MS4A5Q9H3V2 200 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 PRNDQ9UKY0 176 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 ZNF257Q9Y2Q1 563 aa15.25■□□□□ 0.03
COL20A1-205ENST00000471582 POLEQ07864 2286 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 IL6RP08887 468 aaPredicted RBP15.24■□□□□ 0.03
COL20A1-205ENST00000471582 CT45A6P0DMU7 189 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 CT45A5P0DMU8 189 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 CT45A7P0DMV0 189 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 PSMB3P49720 205 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 TMEM249Q2WGJ8 235 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 ZNF833PQ6ZTB9 187 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 RAB24Q969Q5 203 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 ZNF714Q96N38 554 aa15.24■□□□□ 0.03
COL20A1-205ENST00000471582 TMEM250H0YL14 139 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 EFNB3Q15768 340 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 TMEM170AQ8WVE7 144 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 RAB1CQ92928 201 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 USP24Q9UPU5 2620 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 hCG_1809904A0A1W2PP81 198 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 A0A1W2PR64 198 aa15.23■□□□□ 0.03
COL20A1-205ENST00000471582 A0A1W2PRV1 198 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms