RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 KBTBD11O94819 623 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 CSN3P07498 182 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-203ENST00000471344 IGHV4-30-4P0DP06 118 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 EDN2P20800 178 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 PUSL1Q8N0Z8 303 aaKnown RBP11.69□□□□□ -0.54
COL1A1-203ENST00000471344 SLC25A46Q96AG3 418 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 PPP5D1E7EU14 171 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 ACTL6BO94805 426 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 OR2A4O95047 310 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 PPYP01298 95 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 AREGP15514 252 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 FXYD4P59646 89 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 SPCS2Q15005 226 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 RPEL1Q2QD12 228 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 GPR141Q7Z602 305 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 TMEM167AQ8TBQ9 72 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
COL1A1-203ENST00000471344 OR2A7Q96R45 310 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 S4R3C0 116 aa11.68□□□□□ -0.54
COL1A1-203ENST00000471344 CGB1A6NKQ9 187 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 SULT1C2O00338 296 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 CREBL2O60519 120 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-203ENST00000471344 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 HLA-AP01891 365 aaKnown RBP11.67□□□□□ -0.54
COL1A1-203ENST00000471344 REG1AP05451 166 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
COL1A1-203ENST00000471344 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 C15orf32Q32M92 178 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 ZNF818PQ6ZRF7 136 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 TMEM17Q86X19 198 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 CLVS1Q8IUQ0 354 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-203ENST00000471344 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 THAP7Q9BT49 309 aaPredicted RBP11.67□□□□□ -0.54
COL1A1-203ENST00000471344 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 DIABLOQ9NR28 239 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 DMRT1Q9Y5R6 373 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 SACSQ9NZJ4 4579 aa11.67□□□□□ -0.54
COL1A1-203ENST00000471344 CSMD3Q7Z407 3707 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 EIF4EP06730 217 aaKnown RBP11.66□□□□□ -0.54
COL1A1-203ENST00000471344 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 MSMO1Q15800 293 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 SPAG16Q8N0X2 631 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 FANCD2OSQ96PS1 177 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 SELENOKQ9Y6D0 94 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
COL1A1-203ENST00000471344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
COL1A1-203ENST00000471344 XRCC3O43542 346 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 NDUFB8O95169 186 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 CBX5P45973 191 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 OR4A47Q6IF82 309 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 SAMD12Q8N8I0 201 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 NECAP1Q8NC96 275 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 OR5AP2Q8NGF4 316 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 OR51H1Q8NH63 302 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 CCDC140Q96MF4 163 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 C19orf73Q9NVV2 129 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.54
COL1A1-203ENST00000471344 NPIPB5A8MRT5 1133 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 RPA2P15927 270 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 RFX2P48378 723 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 TAS2R20P59543 309 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 RPL8P62917 257 aaKnown RBP11.64□□□□□ -0.55
COL1A1-203ENST00000471344 UBE2NLQ5JXB2 153 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 VSTM2AQ8TAG5 236 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 TM2D3Q9BRN9 247 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 IFT46Q9NQC8 304 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 SLC2A9Q9NRM0 540 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 EHFQ9NZC4 300 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 COMMD3Q9UBI1 195 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 FBXL7Q9UJT9 491 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
COL1A1-203ENST00000471344 RYR2Q92736 4967 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 DPPA5A6NC42 116 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 HPGDSO60760 199 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 S1PR2O95136 353 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 HRASP01112 189 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 PMP2P02689 132 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 HLA-GP17693 338 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 PSMB6P28072 239 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 RPL5P46777 297 aaKnown RBP11.63□□□□□ -0.55
COL1A1-203ENST00000471344 MECP2P51608 486 aaKnown RBP11.63□□□□□ -0.55
COL1A1-203ENST00000471344 TMEM69Q5SWH9 247 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 SLC25A42Q86VD7 318 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 ZBTB34Q8NCN2 500 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 S100A16Q96FQ6 103 aaKnown RBP11.63□□□□□ -0.55
COL1A1-203ENST00000471344 FXYD6Q9H0Q3 95 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 HRASLSQ9HDD0 168 aa11.63□□□□□ -0.55
COL1A1-203ENST00000471344 BET1LQ9NYM9 111 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms