RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 C20orf202A1L168 122 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 B4DEV8 164 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 M0R381 172 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 DNASE2O00115 360 aaPredicted RBP3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 TNFSF13O75888 250 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 APOMO95445 188 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 OR2H2O95918 312 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 ADRA2AP08913 450 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 OR10J1P30954 320 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 GABRA3P34903 492 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 GABRA2P47869 451 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 GABARAPL2P60520 117 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 PPP1CAP62136 330 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 NCS1P62166 190 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 GNA12Q03113 381 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 RELAQ04206 551 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 DNLZQ5SXM8 178 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 HRCT1Q6UXD1 115 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 HSD17B13Q7Z5P4 300 aaPredicted RBP3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 DEFB128Q7Z7B8 93 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 OR8I2Q8N0Y5 310 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 YIPF7Q8N8F6 280 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 OR5W2Q8NH69 310 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 OR4C6Q8NH72 309 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 ISOC1Q96CN7 298 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 HSD17B10Q99714 261 aaKnown RBP3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 THTPAQ9BU02 230 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 PARP12Q9H0J9 701 aaKnown RBP3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 GTSF1LQ9H1H1 148 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 MED28Q9H204 178 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 FAIMQ9NVQ4 179 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 TMEM38BQ9NVV0 291 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 LAMTOR3Q9UHA4 124 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 RPUSD1Q9UJJ7 312 aaKnown RBP3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 CYSLTR1Q9Y271 337 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 COQ4Q9Y3A0 265 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 SETD1AO15047 1707 aaKnown RBP3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 ERBINQ96RT1 1412 aa3.19□□□□□ -1.9
PRPF40A-206ENST00000471167 DYSFO75923 2080 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 NAV1Q8NEY1 1877 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 RB1CC1Q8TDY2 1594 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 TRBV19A0A075B6N1 114 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 IGHV1-69-2A0A0G2JMI3 117 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 A0A0J9YY10 115 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 A0A1B0GX78 115 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 GSTZ1O43708 216 aaPredicted RBP3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 DEDDO75618 318 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 GABARAPO95166 117 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 CXorf1O96002 111 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 HLA-DQB2P05538 268 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 PSG2P11465 335 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 IMPA1P29218 277 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 S100A11P31949 105 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 GNB2P62879 340 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 CAV1Q03135 178 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 LOXL1Q08397 574 aaPredicted RBP3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 CST6Q15828 149 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 PRSS54Q6PEW0 395 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 RASL11AQ6T310 242 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 MOB1BQ7L9L4 216 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 TCTE3Q8IZS6 198 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 C12orf45Q8N5I9 185 aaPredicted RBP3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 NUP35Q8NFH5 326 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 OR4E2Q8NGC2 313 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 OR1J4Q8NGS1 313 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 SMIM14Q96QK8 99 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 TIMM17AQ99595 171 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 NAT8BQ9UHF3 227 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 MED31Q9Y3C7 131 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 NOS1P29475 1434 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 TNS3Q68CZ2 1445 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 SSH2Q76I76 1423 aa3.18□□□□□ -1.9
PRPF40A-206ENST00000471167 NALCNQ8IZF0 1738 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 A0A1B0GW64 132 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 FABP5P3A8MUU1 101 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 KRBOX1C9JBD0 128 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF861PO60384 105 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 HLA-DPB1P04440 258 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 SCTP09683 121 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 TDGF1P13385 188 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 MUC1P15941 1255 aaPredicted RBP3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 LPAR6P43657 344 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 INPP1P49441 399 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 TDGF1P3P51864 188 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 DHRS2Q13268 280 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 ENDOGQ14249 297 aaKnown RBP3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 TMEM69Q5SWH9 247 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 HES3Q5TGS1 186 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 LYRM7Q5U5X0 104 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 Q6Q795 121 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 UNQ9165/PRO28630Q6UXU0 137 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 RNF165Q6ZSG1 346 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 CROCCP2Q86T23 111 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 MARCH3Q86UD3 253 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 ABHD14BQ96IU4 210 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms