RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 FAM212BQ9NTI7 297 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 ZMAT5Q9UDW3 170 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 MOB4Q9Y3A3 225 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 PRELID3BQ9Y3B1 194 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 A0A0B4J293 547 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 A0A0B4J2A0 478 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 FAM90A9PA6NNJ1 464 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 RBFOX2O43251 390 aaKnown RBP eCLIP7.14□□□□□ -1.27
SF3A1-206ENST00000471037 OR5AC1P0C628 307 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 NHLRC4P0CG21 123 aaPredicted RBP7.14□□□□□ -1.27
SF3A1-206ENST00000471037 C9orf152Q5JTZ5 239 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 TPTE2P1Q5T6R2 138 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 THNSL2Q86YJ6 484 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 OR51H1Q8NH63 302 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 COQ8AQ8NI60 647 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 MITD1Q8WV92 249 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 TCTEX1D2Q8WW35 142 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 P2RX4Q99571 388 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 SEC22CQ9BRL7 303 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 MRPL20Q9BYC9 149 aaKnown RBP7.14□□□□□ -1.27
SF3A1-206ENST00000471037 ZFP57Q9NU63 452 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 SHPKQ9UHJ6 478 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 ALG5Q9Y673 324 aa7.14□□□□□ -1.27
SF3A1-206ENST00000471037 LINC00473A8K010 186 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 FGF16O43320 207 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 APOA2P02652 100 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 SERPINE2P07093 398 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 FAM106CPP0CH98 169 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 CT45A6P0DMU7 189 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 CT45A5P0DMU8 189 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 CT45A7P0DMV0 189 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 RRASP10301 218 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 RPA2P15927 270 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 UCP1P25874 307 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 MC5RP33032 325 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 MYCNOSP40205 109 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 REG1BP48304 166 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 RPL30P62888 115 aaKnown RBP7.13□□□□□ -1.27
SF3A1-206ENST00000471037 CBX3Q13185 183 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM187Q14656 261 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 RTL8BQ17RB0 113 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 ZNF329Q86UD4 541 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 SPAG16Q8N0X2 631 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 COMMD1Q8N668 190 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 ZNF383Q8NA42 475 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 DRAXINQ8NBI3 349 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-206ENST00000471037 OR5AN1Q8NGI8 311 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 OR52B4Q8NGK2 314 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 OR4S2Q8NH73 311 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 CASTOR1Q8WTX7 329 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 GLYATL2Q8WU03 294 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 DDB2Q92466 427 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 IL22RA2Q969J5 263 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 TP53RKQ96S44 253 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 GPHA2Q96T91 129 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 PHB2Q99623 299 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 NABP2Q9BQ15 211 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM222Q9H0R3 208 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 OR51J1Q9H342 316 aa7.13□□□□□ -1.27
SF3A1-206ENST00000471037 IGHV1-3A0A0C4DH29 117 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 DUXBA0A1W2PPF3 345 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 A0A1W2PPI3 338 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 H0YJW9 148 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 RAMP3O60896 148 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 FCGR3BO75015 233 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 ATG12O94817 140 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 CDS2O95674 445 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 DIAPH2-AS1Q14236 149 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 SP6Q3SY56 376 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 C18orf65Q6ZTR6 163 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 C8orf86Q6ZUL3 223 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 PDPNQ86YL7 162 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 LGI3Q8N145 548 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 C12orf45Q8N5I9 185 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-206ENST00000471037 C5orf56Q8N8D9 126 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 LRTM2Q8N967 370 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 RBPMSQ93062 196 aaKnown RBP7.12□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM56Q96MV1 263 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 SLC35D1Q9NTN3 355 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 WASHC3Q9Y3C0 194 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 LSM4Q9Y4Z0 139 aaKnown RBP7.12□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM56-RWDD3S4R434 201 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 U3KQK5 164 aa7.12□□□□□ -1.27
SF3A1-206ENST00000471037 NUDT19A8MXV4 375 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 H7C2Y5 167 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 SSNA1O43805 119 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 HPRT1P00492 218 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 IGHG2P01859 326 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 SNRNP70P08621 437 aaKnown RBP7.11□□□□□ -1.27
SF3A1-206ENST00000471037 CD1BP29016 333 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 LINC00205P59089 165 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 SLC35B1P78383 322 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 ANKRD55Q3KP44 614 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 ZNF585BQ52M93 769 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 OR2B11Q5JQS5 317 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 DMRTA1Q5VZB9 504 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 MOB3BQ86TA1 216 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 ZNF695Q8IW36 515 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 KLHL30-AS1Q8NEE0 82 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms