RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 LHX4Q969G2 390 aa6.7□□□□□ -1.34
GTF3A-206ENST00000470606 HARBI1Q96MB7 349 aa6.7□□□□□ -1.34
GTF3A-206ENST00000470606 LYRM2Q9NU23 88 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-206ENST00000470606 BEX4Q9NWD9 120 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-206ENST00000470606 DPM3Q9P2X0 92 aa6.7□□□□□ -1.34
GTF3A-206ENST00000470606 SOX21Q9Y651 276 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-206ENST00000470606 CENPVL3A0A0U1RRI6 287 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 TIMM23O14925 209 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 SHOXO15266 292 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 BCL2L11O43521 198 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 SPDEFO95238 335 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 RLN2P04090 185 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 GAPDHP04406 335 aaKnown RBP6.69□□□□□ -1.34
GTF3A-206ENST00000470606 DSCR9P59020 149 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 EXOSC2Q13868 293 aaKnown RBP6.69□□□□□ -1.34
GTF3A-206ENST00000470606 HABP2Q14520 560 aaPredicted RBP6.69□□□□□ -1.34
GTF3A-206ENST00000470606 SSX2Q16385 188 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 Q5PR19 223 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 DHRS7BQ6IAN0 325 aaPredicted RBP6.69□□□□□ -1.34
GTF3A-206ENST00000470606 MOB3BQ86TA1 216 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 PDPNQ86YL7 162 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 OR2C3Q8N628 320 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 OR4C13Q8NGP0 309 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 TMEM170AQ8WVE7 144 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 PCNPQ8WW12 178 aaKnown RBP6.69□□□□□ -1.34
GTF3A-206ENST00000470606 RPEQ96AT9 228 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 FLYWCH2Q96CP2 140 aaKnown RBP6.69□□□□□ -1.34
GTF3A-206ENST00000470606 C1orf159Q96HA4 380 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 SMIM3Q9BZL3 60 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 SLA2Q9H6Q3 261 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 TMEM14BQ9NUH8 114 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 FBXL17Q9UF56 701 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 WASHC3Q9Y3C0 194 aa6.69□□□□□ -1.34
GTF3A-206ENST00000470606 IGHV3OR16-10A0A075B7F0 116 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 CGB1A6NKQ9 187 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 FAM90A9PA6NNJ1 464 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 C15orf61A6NNL5 157 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 LEUTXA8MZ59 168 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 FAM90A26D6RGX4 464 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 TXNL1O43396 289 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 CST7O76096 145 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 VENTXO95231 258 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 HRASP01112 189 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 APOA2P02652 100 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 MSMBP08118 114 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 SLC25A16P16260 332 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 IL3RAP26951 378 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 RAB13P51153 203 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 CAV2P51636 162 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 SSBP2P81877 361 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 EWSR1Q01844 656 aaKnown RBP eCLIP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 PDLIM3Q53GG5 364 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 RUSC1-AS1Q66K80 236 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 RPL7L1Q6DKI1 246 aaKnown RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 ZNF429Q86V71 674 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 LRRC75A-AS1Q8N1F1 130 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 OR8H1Q8NGG4 311 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 OSR1Q8TAX0 266 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 OR4C12Q96R67 309 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 PIGBOS1A0A0B4J2F0 54 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 UPK2O00526 184 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 SLC25A17O43808 307 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 ATG12O94817 140 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 KBTBD11O94819 623 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 OPN1MWP04001 364 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 CRYGBP07316 175 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 OPN1MW2P0DN77 364 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 OPN1MW3P0DN78 364 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 IGHV4-38-2P0DP08 117 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 SAA4P35542 130 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 VDAC2P45880 294 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 UBE2E1P51965 193 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 F2RL1P55085 397 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 ERVK-16P61578 105 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 RPS16P62249 146 aaKnown RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 TMEM267Q0VDI3 215 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 ALKAL2Q6UX46 152 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 THNSL2Q86YJ6 484 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 ST8SIA2Q92186 375 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 SMIM8Q96KF7 97 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 ARPC5LQ9BPX5 153 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 MS4A7Q9GZW8 240 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 HIF1ANQ9NWT6 349 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 BET1LQ9NYM9 111 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 PLA2G2EQ9NZK7 142 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 TCF19Q9Y242 345 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 FOXA2Q9Y261 457 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-206ENST00000470606 RFNGQ9Y644 331 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 WSB1Q9Y6I7 421 aa6.68□□□□□ -1.34
GTF3A-206ENST00000470606 PMS2P5A8MQ11 134 aa6.67□□□□□ -1.34
GTF3A-206ENST00000470606 GPR137BO60478 399 aa6.67□□□□□ -1.34
GTF3A-206ENST00000470606 RBMXL2O75526 392 aaKnown RBP6.67□□□□□ -1.34
GTF3A-206ENST00000470606 RRASP10301 218 aa6.67□□□□□ -1.34
GTF3A-206ENST00000470606 MC5RP33032 325 aa6.67□□□□□ -1.34
GTF3A-206ENST00000470606 KLF17Q5JT82 389 aaPredicted RBP6.67□□□□□ -1.34
GTF3A-206ENST00000470606 FAM120AOSQ5T036 256 aa6.67□□□□□ -1.34
GTF3A-206ENST00000470606 GPR157Q5UAW9 335 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms