RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RAB24Q969Q5 203 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 RPUSD4Q96CM3 377 aaKnown RBP6.61□□□□□ -1.35
SMC4-212ENST00000470240 C5orf30Q96GV9 206 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 FAM210BQ96KR6 192 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 OR4F4Q96R69 305 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 DCTN5Q9BTE1 182 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 IFI27L2Q9H2X8 130 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 FKBP11Q9NYL4 201 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 FOXA2Q9Y261 457 aaPredicted RBP6.61□□□□□ -1.35
SMC4-212ENST00000470240 TP53TG5Q9Y2B4 290 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 URGCP-MRPS24S4R325 110 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 DNAH14Q0VDD8 3507 aa6.61□□□□□ -1.35
SMC4-212ENST00000470240 HEATR1Q9H583 2144 aaKnown RBP6.61□□□□□ -1.35
SMC4-212ENST00000470240 C15orf61A6NNL5 157 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 PMS2P5A8MQ11 134 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 A8MXE2 369 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 SEC14L6B5MCN3 397 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 FNDC10F2Z333 226 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 SMAD7O15105 426 aaKnown RBP6.6□□□□□ -1.35
SMC4-212ENST00000470240 EIF3GO75821 320 aaKnown RBP eCLIP6.6□□□□□ -1.358e-13■■■■■ 59.2
SMC4-212ENST00000470240 CXorf1O96002 111 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 IGHV1-46P01743 117 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 TFF1P04155 84 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 OR9G9P0C7N8 305 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 NPY1RP25929 384 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 NDUFA6P56556 154 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 LOXL3P58215 753 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 RHOBP62745 196 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 MEF2CQ06413 473 aaPredicted RBP6.6□□□□□ -1.35
SMC4-212ENST00000470240 TMEM249Q2WGJ8 235 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 RPL39P5Q59GN2 51 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 SPINK9Q5DT21 86 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 WDR25Q64LD2 544 aaPredicted RBP6.6□□□□□ -1.35
SMC4-212ENST00000470240 STUMQ69YW2 141 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 ASCL5Q7RTU5 278 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 LRP11Q86VZ4 500 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 KRTAP1-3Q8IUG1 177 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 RPP25LQ8N5L8 163 aaKnown RBP6.6□□□□□ -1.35
SMC4-212ENST00000470240 RBMXL3Q8N7X1 1067 aaKnown RBP6.6□□□□□ -1.35
SMC4-212ENST00000470240 SLC24A4Q8NFF2 622 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 Q8WTZ3 238 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 TMEM204Q9BSN7 226 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 PLEKHA3Q9HB20 300 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 TCF19Q9Y242 345 aa6.6□□□□□ -1.35
SMC4-212ENST00000470240 INTS1Q8N201 2190 aaKnown RBP6.59□□□□□ -1.35
SMC4-212ENST00000470240 GPR179Q6PRD1 2367 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 SAA2-SAA4A0A096LPE2 208 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 C11orf94C9JXX5 98 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 PPP5D1E7EU14 171 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 IGHV2-5P01817 119 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 CD55P08174 381 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 SAA2P0DJI9 122 aaPredicted RBP6.59□□□□□ -1.35
SMC4-212ENST00000470240 NDUFB7P17568 137 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 TMPRSS3P57727 454 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 BRWD1-AS2P59051 145 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 HSPE1P61604 102 aaKnown RBP6.59□□□□□ -1.35
SMC4-212ENST00000470240 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
SMC4-212ENST00000470240 TEX36Q5VZQ5 186 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 TEPPQ6URK8 271 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 GFRALQ6UXV0 394 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 TGIF2LYQ8IUE0 185 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 VSTM2AQ8TAG5 236 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 YPEL4Q96NS1 127 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 UHRF2Q96PU4 802 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 PARLQ9H300 379 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 CHODLQ9H9P2 273 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 NPVFQ9HCQ7 196 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 GCM1Q9NP62 436 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 SLC35D1Q9NTN3 355 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 ZNF257Q9Y2Q1 563 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 OR51B2Q9Y5P1 312 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 LINC00312Q9Y6C7 94 aa6.59□□□□□ -1.35
SMC4-212ENST00000470240 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 TGIF2-C20orf24A0A0A6YYL0 155 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 C17orf100A8MU93 164 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 PAGE4O60829 102 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 WISP2O76076 250 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 IGKV1D-33P01593 117 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 IGKV1-33P01594 117 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 GYPAP02724 150 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CGB3P0DN86 165 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CGB7P0DN87 165 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CD99P14209 185 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 IL3RAP26951 378 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 SRP14P37108 136 aaKnown RBP6.58□□□□□ -1.36
SMC4-212ENST00000470240 VDAC2P45880 294 aaPredicted RBP6.58□□□□□ -1.36
SMC4-212ENST00000470240 GALR1P47211 349 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CDX1P47902 265 aaPredicted RBP6.58□□□□□ -1.36
SMC4-212ENST00000470240 GNG10P50151 68 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CASP6P55212 293 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 TAS2R45P59539 299 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 CD81P60033 236 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 B2MP61769 119 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 ZNF124Q15973 351 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 POU2AF1Q16633 256 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 C17orf58Q2M2W7 97 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 LRRC10Q5BKY1 277 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 OR4A47Q6IF82 309 aa6.58□□□□□ -1.36
SMC4-212ENST00000470240 FAM71F2Q6NXP2 309 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms