RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SYNGR1O43759 233 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 NUPR1O60356 82 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 CHRNB4P30926 498 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 BRS3P32247 399 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 TMEM183BQ1AE95 376 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 TPTE2P1Q5T6R2 138 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 FAM58AQ8N1B3 248 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 OR1K1Q8NGR3 316 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 CIB3Q96Q77 187 aaPredicted RBP8□□□□□ -1.13
HDAC3-205ENST00000469550 LINC00470Q9BZP3 86 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 PKIBQ9C010 78 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 ZDHHC11Q9H8X9 412 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 CTNNBIP1Q9NSA3 81 aaPredicted RBP8□□□□□ -1.13
HDAC3-205ENST00000469550 C2CD3Q4AC94 2353 aa8□□□□□ -1.13
HDAC3-205ENST00000469550 CHD3Q12873 2000 aaKnown RBP8□□□□□ -1.13
HDAC3-205ENST00000469550 DCHS2Q6V1P9 2916 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 MED13LQ71F56 2210 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 HIVEP1P15822 2718 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 LRRC30A6NM36 301 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
HDAC3-205ENST00000469550 KRASP01116 189 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 IRF2P14316 349 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 CDC34P49427 236 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-205ENST00000469550 GNB1P62873 340 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 MRPS11P82912 194 aaKnown RBP7.99□□□□□ -1.13
HDAC3-205ENST00000469550 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 SGMS2Q8NHU3 365 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 RDH5Q92781 318 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 SFRP2Q96HF1 295 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 SGCZQ96LD1 299 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 MPC1Q9Y5U8 109 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 KIAA2026Q5HYC2 2103 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 ZNHIT1O43257 154 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 CXCL13O43927 109 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 IGHG3P01860 377 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 GNG3P63215 75 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 Q0VG73 95 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 Q6P435 159 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF497Q6ZNH5 498 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 Q6ZWC4 215 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 DRAM1Q8N682 238 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 TCTEX1D1Q8N7M0 179 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 IL1F10Q8WWZ1 152 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 RND1Q92730 232 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 SDSLQ96GA7 329 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 DEPPQ9NTK1 212 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 MBNL3Q9NUK0 354 aaKnown RBP7.99□□□□□ -1.13
HDAC3-205ENST00000469550 CRIM1Q9NZV1 1036 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 WIPI2Q9Y4P8 454 aa7.99□□□□□ -1.13
HDAC3-205ENST00000469550 EML6Q6ZMW3 1958 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 MDFIC2A0A1B0GVS7 189 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 IL6RP08887 468 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-205ENST00000469550 NPSP0C0P6 89 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF16P17020 682 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-205ENST00000469550 ADMP35318 185 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 WNT5AP41221 380 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 CST9LP1Q5W188 147 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 CYB5R2Q6BCY4 276 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 TOMM20LQ6UXN7 152 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 OR2M7Q8NG81 312 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 OR10D3Q8NH80 312 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 OR1L1Q8NH94 360 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 WFIKKN1Q96NZ8 548 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 LPAR2Q9HBW0 351 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 TP53TG3Q9ULZ0 132 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 RBM7Q9Y580 266 aaKnown RBP7.98□□□□□ -1.13
HDAC3-205ENST00000469550 CCDC168Q8NDH2 2452 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 POLQO75417 2590 aa7.98□□□□□ -1.13
HDAC3-205ENST00000469550 IGKV3D-15A0A087WSY6 115 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 PINLYPA6NC86 204 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 G3V3Y1 287 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 RAB29O14966 203 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 WDR1O75083 606 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 MMP23AO75900 390 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 KITLGP21583 273 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 LHX2P50458 406 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-205ENST00000469550 Q8N7P7 452 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 TTTY12Q9BZ98 90 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 OR2J1Q9GZK6 312 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 KCNS2Q9ULS6 477 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF407Q9C0G0 2248 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 TRBV9A0A0B4J1U6 114 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ANKRD30BLA7E2S9 258 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 J3QT63 122 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 IFNL4K9M1U5 179 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 AQP7O14520 342 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 MPDU1O75352 247 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 NDUFB4O95168 129 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 TIMP3P35625 211 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 LINC00310P59036 64 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ARF1P84077 181 aaKnown RBP7.97□□□□□ -1.13
HDAC3-205ENST00000469550 EIF4EBP1Q13541 118 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-205ENST00000469550 COL5A1-AS1Q5SY13 56 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 YRDCQ86U90 279 aaKnown RBP7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF645Q8N7E2 425 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 OR5T1Q8NG75 326 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 OR5AU1Q8NGC0 362 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 OR10G8Q8NGN5 311 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms