RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 NAP1L6A6NFF2 107 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 G3V318 75 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 H0Y980 276 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 ACTL6BO94805 426 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 KBTBD11O94819 623 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 SERPINE2P07093 398 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 CD40LGP29965 261 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 PPIFP30405 207 aaKnown RBP9.38□□□□□ -0.91
VPS13D-204ENST00000469054 ERVK-16P61578 105 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 CD83Q01151 205 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 TMEM267Q0VDI3 215 aaPredicted RBP9.38□□□□□ -0.91
VPS13D-204ENST00000469054 ECSCRQ19T08 205 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 TCTEX1D4Q5JR98 221 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 OR4A47Q6IF82 309 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 TEX38Q6PEX7 206 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 DMBX1Q8NFW5 382 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 OR4A5Q8NH83 315 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 TMEM167AQ8TBQ9 72 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 SLC25A21Q9BQT8 299 aaPredicted RBP9.38□□□□□ -0.91
VPS13D-204ENST00000469054 C7orf50Q9BRJ6 194 aaKnown RBP9.38□□□□□ -0.91
VPS13D-204ENST00000469054 WDR12Q9GZL7 423 aaKnown RBP9.38□□□□□ -0.91
VPS13D-204ENST00000469054 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
VPS13D-204ENST00000469054 VSIG4Q9Y279 399 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 TEX13DA0A0J9YY54 714 aaPredicted RBP9.37□□□□□ -0.91
VPS13D-204ENST00000469054 CENPXA8MT69 81 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 UPK2O00526 184 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 B3GALNT1O75752 331 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 KRASP01116 189 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 IGHG4P01861 327 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
VPS13D-204ENST00000469054 RPA2P15927 270 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 TNXAQ16473 311 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 AKIRIN2Q53H80 203 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 NDUFA11Q86Y39 141 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 CADM3Q8N126 398 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
VPS13D-204ENST00000469054 TMEM68Q96MH6 324 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 TP53RKQ96S44 253 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 NAA60Q9H7X0 242 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
VPS13D-204ENST00000469054 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 A0A1W2PN81 502 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 TCRBV4S1A1TA0A5B7 111 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 MSGN1A6NI15 193 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 CRYM-AS1A6NIL9 109 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 PLA2G10O15496 165 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 OPN1MWP04001 364 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 ELANEP08246 267 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 OR5AC1P0C628 307 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 OPN1MW2P0DN77 364 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 OPN1MW3P0DN78 364 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 UCP1P25874 307 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 MAS1LP35410 378 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 G6PCP35575 357 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 CHRNA7P36544 502 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 RPL8P62917 257 aaKnown RBP9.36□□□□□ -0.91
VPS13D-204ENST00000469054 FOXE3Q13461 319 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 SP6Q3SY56 376 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 C19orf54Q5BKX5 351 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 UNQ5815/PRO19632Q6UWF5 114 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 RNF152Q8N8N0 203 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 ADAD2Q8NCV1 583 aaKnown RBP9.36□□□□□ -0.91
VPS13D-204ENST00000469054 TMEM230Q96A57 120 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 KCNIP3Q9Y2W7 256 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 TSSC4Q9Y5U2 329 aaPredicted RBP9.36□□□□□ -0.91
VPS13D-204ENST00000469054 ANK2Q01484 3957 aa9.36□□□□□ -0.91
VPS13D-204ENST00000469054 TRAV3A0A0B4J244 114 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 M0QZ24 198 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 FGF2P09038 288 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 AKR1C4P17516 323 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 HLA-GP17693 338 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 PSMB8P28062 276 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 CCR6P51684 374 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 RBMS2Q15434 407 aaKnown RBP9.35□□□□□ -0.91
VPS13D-204ENST00000469054 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 CXorf66Q5JRM2 361 aaPredicted RBP9.35□□□□□ -0.91
VPS13D-204ENST00000469054 C10orf55Q5SWW7 151 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 OR5M8Q8NGP6 311 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 GLYATL2Q8WU03 294 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 GALNT14Q96FL9 552 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 SEC22AQ96IW7 307 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 PHB2Q99623 299 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 ZFP57Q9NU63 452 aa9.35□□□□□ -0.91
VPS13D-204ENST00000469054 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
VPS13D-204ENST00000469054 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
VPS13D-204ENST00000469054 E7EUB6 86 aa9.34□□□□□ -0.91
VPS13D-204ENST00000469054 LYRM1O43325 122 aa9.34□□□□□ -0.91
VPS13D-204ENST00000469054 SOX15O60248 233 aa9.34□□□□□ -0.91
VPS13D-204ENST00000469054 ATG12O94817 140 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms