RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SUPT4H1P63272 117 aaKnown RBP6.5□□□□□ -1.37
HDAC6-216ENST00000468949 EBI3Q14213 229 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 C9orf152Q5JTZ5 239 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 VKORC1L1Q8N0U8 176 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 SLC35G3Q8N808 338 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 OR4A16Q8NH70 328 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 OR4A5Q8NH83 315 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 MITD1Q8WV92 249 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM158Q8WZ71 300 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 RBM14Q96PK6 669 aaKnown RBP6.5□□□□□ -1.37
HDAC6-216ENST00000468949 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 MED28Q9H204 178 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 OR51J1Q9H342 316 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 FBXL15Q9H469 300 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM140Q9NV12 185 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 PRR13Q9NZ81 148 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 SHPKQ9UHJ6 478 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 TMED3Q9Y3Q3 217 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 ALG5Q9Y673 324 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 C13orf42A0A1B0GVH6 325 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 C5orf51A6NDU8 294 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 A6NDX4 124 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 TRIM77I1YAP6 450 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 GOSR2O14653 212 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 FGF16O43320 207 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 KBTBD11O94819 623 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 CDS2O95674 445 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 SULT1A3P0DMM9 295 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 SULT1A4P0DMN0 295 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 HILS1P60008 231 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 PSG5Q15238 335 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 TNXAQ16473 311 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 C5orf64Q2M2E5 130 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 ANKRD55Q3KP44 614 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 ZNF585BQ52M93 769 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 GSG1LQ6UXU4 331 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 MRPL41Q8IXM3 137 aaKnown RBP6.49□□□□□ -1.37
HDAC6-216ENST00000468949 MMD2Q8IY49 270 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 SELENOHQ8IZQ5 122 aaKnown RBP6.49□□□□□ -1.37
HDAC6-216ENST00000468949 TEX45Q8NA69 505 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 OR1S1Q8NH92 325 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM56Q96MV1 263 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 CLCC1Q96S66 551 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 MDFIQ99750 246 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 CHIAQ9BZP6 476 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 COMMD5Q9GZQ3 224 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 PRDM13Q9H4Q3 707 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 RANBP3Q9H6Z4 567 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-216ENST00000468949 ENY2Q9NPA8 101 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 BET1LQ9NYM9 111 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 CACFD1Q9UGQ2 172 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 PRNDQ9UKY0 176 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 MMP24Q9Y5R2 645 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM56-RWDD3S4R434 201 aa6.49□□□□□ -1.37
HDAC6-216ENST00000468949 hCG_2014768A0A024R1R8 64 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 WRBO00258 174 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 KCNAB3O43448 404 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 GPR137BO60478 399 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 NDUFA3O95167 84 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 CA2P00918 260 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 IFNA17P01571 189 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 CNTFRP26992 372 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 F2RL1P55085 397 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 OR2B8PP59922 312 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 RPL8P62917 257 aaKnown RBP6.48□□□□□ -1.37
HDAC6-216ENST00000468949 SMCO1Q147U7 214 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 LYZL2Q7Z4W2 148 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 PPP1R27Q86WC6 154 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 Q8N6K4 173 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 C5orf56Q8N8D9 126 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 LRTM2Q8N967 370 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 NPBQ8NG41 125 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 GRPEL2Q8TAA5 225 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 LHFPL5Q8TAF8 219 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 LSM10Q969L4 123 aaKnown RBP6.48□□□□□ -1.37
HDAC6-216ENST00000468949 SEC22AQ96IW7 307 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 HINT2Q9BX68 163 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 PARP11Q9NR21 331 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 MGAT4CQ9UBM8 478 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 CACNG5Q9UF02 275 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 SIGLEC9Q9Y336 463 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 ATRQ13535 2644 aa6.48□□□□□ -1.37
HDAC6-216ENST00000468949 A0A1B0GU03 582 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 C7orf66A4D0T2 115 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 C15orf61A6NNL5 157 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 SRRM4A7MD48 611 aaKnown RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 CLDN34H7C241 214 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 CCSO14618 274 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 CHST1O43916 411 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 ADAP1O75689 374 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 SCGB1D2O95969 90 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 IGKV1-39P01597 117 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 IGLV2-23P01705 113 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 HLA-DRB1P01911 266 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 IGKV1D-39P04432 117 aa6.47□□□□□ -1.37
HDAC6-216ENST00000468949 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
HDAC6-216ENST00000468949 FGF2P09038 288 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms