RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 CHD6Q8TD26 2715 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 B4DSR2 109 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 KBTBD11O94819 623 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 FGF2P09038 288 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 SAA1P0DJI8 122 aaPredicted RBP12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 IAPPP10997 89 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 CAV2P51636 162 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 NHLH2Q02577 135 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 BAXQ07812 192 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 LOXL1Q08397 574 aaPredicted RBP12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 FBXL17Q9UF56 701 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
CRAMP1-206ENST00000468839 TRAV20A0A0B4J274 112 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 IFNA17P01571 189 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 MSMBP08118 114 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 LGALS4P56470 323 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 OR2B8PP59922 312 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 EIF5AP63241 154 aaKnown RBP12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 CCDC144NLQ6NUI1 221 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 LHFPL4Q7Z7J7 247 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 DTD1Q8TEA8 209 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 CFHR4Q92496 578 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 MALSU1Q96EH3 234 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 PHYHIPLQ96FC7 376 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 TCF19Q9Y242 345 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 LRRK2Q5S007 2527 aa12.09□□□□□ -0.47
CRAMP1-206ENST00000468839 IGHV3-72A0A0B4J1Y9 119 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 CEBPZOSA8MTT3 80 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 JTBO76095 146 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 CRYGBP07316 175 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 GATA3P23771 443 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 VDAC2P45880 294 aaPredicted RBP12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 HIST2H2BCQ6DN03 193 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 TMEM14EPQ6UXP3 125 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 STPG2Q8N412 459 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 SCARB1Q8WTV0 552 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 RBMXL1Q96E39 390 aaKnown RBP12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 TSNAXQ99598 290 aaKnown RBP12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 ARV1Q9H2C2 271 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 ITGB1BP2Q9UKP3 347 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 USP9YO00507 2555 aaPredicted RBP12.08□□□□□ -0.48
CRAMP1-206ENST00000468839 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 CENPVL3A0A0U1RRI6 287 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 TIMM23O14925 209 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 VENTXO95231 258 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 SPDEFO95238 335 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 SULT1A1P50225 295 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 RPL7L1Q6DKI1 246 aaKnown RBP12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.485e-7■■■□□ 16.3
CRAMP1-206ENST00000468839 CLEC9AQ6UXN8 241 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 STX12Q86Y82 276 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 BAP18Q8IXM2 172 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 RITA1Q96K30 269 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 WFDC1Q9HC57 220 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 NUP50Q9UKX7 468 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 HILPDAQ9Y5L2 63 aa12.07□□□□□ -0.48
CRAMP1-206ENST00000468839 ANKRD17O75179 2603 aaKnown RBP12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 BORCS7-ASMTA0A0B4J1R7 106 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 TEX50A0A1B0GTY4 177 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 A0A1W2PRD5 423 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 A0A1W2PRF3 423 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 A0A1W2PRM7 423 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 NPFFO15130 113 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 SCAF4O95104 1147 aaKnown RBP12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 DYNLT3P51808 116 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 RPL8P62917 257 aaKnown RBP12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 EBI3Q14213 229 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 PSG5Q15238 335 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 SPANXN5Q5MJ07 72 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 OR1S2Q8NGQ3 325 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 OR5B3Q8NH48 314 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 CLCC1Q96S66 551 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 SMIM3Q9BZL3 60 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 STRAPQ9Y3F4 350 aaKnown RBP12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 AUP1Q9Y679 476 aa12.06□□□□□ -0.48
CRAMP1-206ENST00000468839 PMS2P5A8MQ11 134 aa12.05□□□□□ -0.48
CRAMP1-206ENST00000468839 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
CRAMP1-206ENST00000468839 H3BP45 60 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms