RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TATDN3Q17R31 274 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 HLA-DRB5Q30154 266 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM30BQ3MIR4 351 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM128Q5BJH2 165 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 GPR157Q5UAW9 335 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 NCR3LG1Q68D85 454 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 HCP5Q6MZN7 132 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 BRD3OSQ6XYD6 125 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C1orf122Q6ZSJ8 110 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 IL17RELQ6ZVW7 336 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 Q71RC1 249 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SSX9Q7RTT3 188 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 LYG2Q86SG7 212 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TGIF2LXQ8IUE1 241 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF695Q8IW36 515 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 ODF3L1Q8IXM7 274 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SPAG16Q8N0X2 631 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C12orf45Q8N5I9 185 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 LINC00311Q8N616 119 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 KIR3DL3Q8N743 410 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 OR4P4Q8NGL7 312 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 COQ8AQ8NI60 647 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 RNASE11Q8TAA1 199 aaKnown RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF596Q8TC21 504 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF431Q8TF32 576 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C17orf50Q8WW18 174 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C22orf15Q8WYQ4 148 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TNFRSF14Q92956 283 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C5orf30Q96GV9 206 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF486Q96H40 463 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TP53RKQ96S44 253 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SMR3AQ99954 134 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 AGMATQ9BSE5 352 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 MRPL20Q9BYC9 149 aaKnown RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CHIAQ9BZP6 476 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TOLLIPQ9H0E2 274 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 MED28Q9H204 178 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 IFI27L2Q9H2X8 130 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 MAP6D1Q9H9H5 199 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC2A9Q9NRM0 540 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TNFRSF19Q9NS68 423 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC35D1Q9NTN3 355 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 DPM3Q9P2X0 92 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 FAM96BQ9Y3D0 163 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 AMMECR1Q9Y4X0 333 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 DOCK11Q5JSL3 2073 aa3.28□□□□□ -1.89
TMEM39A-204ENST00000468545 POLQO75417 2590 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 COL12A1Q99715 3063 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A087X0M5 115 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A0B4J293 547 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 IGHV1-69DA0A0B4J2H0 117 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 IGHV1-3A0A0C4DH29 117 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A0U1RQK1 487 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A1B0GX30 115 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 C5orf51A6NDU8 294 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 CYSRT1A8MQ03 144 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 RNF212BA8MTL3 300 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ITGB1BP1O14713 200 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 NPFFO15130 113 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 PRAF2O60831 178 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 RAMP3O60896 148 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ADAP1O75689 374 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 CRYZL1O95825 349 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 LY6G6DO95868 133 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 KRASP01116 189 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 IFNA21P01568 189 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 IGLV1-47P01700 117 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 IGHV1-69P01742 117 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 APOA2P02652 100 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 FGF2P09038 288 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 CD99P14209 185 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 F2RP25116 425 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 DUTP33316 252 aaKnown RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 SAA4P35542 130 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 G6PCP35575 357 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 CEACAM3P40198 252 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 THBS3P49746 956 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 RAG2P55895 527 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 RND3P61587 244 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 SUPT4H1P63272 117 aaKnown RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 DHRS2Q13268 280 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 HES1Q14469 280 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM187Q14656 261 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 FCN2Q15485 313 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 LY6EQ16553 131 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 C2orf68Q2NKX9 166 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ANKRD55Q3KP44 614 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 LY6G6FQ5SQ64 297 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 LDLRAD2Q5SZI1 272 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM120AOSQ5T036 256 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 TPTE2P1Q5T6R2 138 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 SPNS3Q6ZMD2 512 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF833PQ6ZTB9 187 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 LYZL2Q7Z4W2 148 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 SELENOHQ8IZQ5 122 aaKnown RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 LGI3Q8N145 548 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 DYNAPQ8N1N2 210 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF383Q8NA42 475 aa3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.27□□□□□ -1.89
TMEM39A-204ENST00000468545 OR11H6Q8NGC7 330 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms