RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 C10orf55Q5SWW7 151 aa13.46□□□□□ -0.25
CLDN11-202ENST00000468358 ALX4Q9H161 411 aaPredicted RBP13.46□□□□□ -0.25
CLDN11-202ENST00000468358 HRASLSQ9HDD0 168 aa13.46□□□□□ -0.25
CLDN11-202ENST00000468358 GPR31O00270 319 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 RBFOX2O43251 390 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLDN11-202ENST00000468358 TPPPO94811 219 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 HPRT1P00492 218 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
CLDN11-202ENST00000468358 OR8U8P0C7N1 319 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 HOXD3P31249 432 aaPredicted RBP13.45□□□□□ -0.26
CLDN11-202ENST00000468358 PHLDA2Q53GA4 152 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 ASPHD1Q5U4P2 390 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 LPCAT3Q6P1A2 487 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 TMEM167AQ8TBQ9 72 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 CD300LFQ8TDQ1 290 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 SPIN2AQ99865 258 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 SPIN2BQ9BPZ2 258 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 MTFP1Q9UDX5 166 aa13.45□□□□□ -0.26
CLDN11-202ENST00000468358 C13orf42A0A1B0GVH6 325 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 H3BUA1 57 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
CLDN11-202ENST00000468358 S1PR2O95136 353 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 CD3DP04234 171 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 RPA2P15927 270 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 NQO2P16083 231 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 RPL27AP46776 148 aaKnown RBP13.44□□□□□ -0.26
CLDN11-202ENST00000468358 TAS2R31P59538 309 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 DGCR2P98153 550 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 RUNX1Q01196 453 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 VAX1Q5SQQ9 334 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 OR4A47Q6IF82 309 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 PUSL1Q8N0Z8 303 aaKnown RBP13.44□□□□□ -0.26
CLDN11-202ENST00000468358 MCFD2Q8NI22 146 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
CLDN11-202ENST00000468358 TINAGL1Q9GZM7 467 aaPredicted RBP13.44□□□□□ -0.26
CLDN11-202ENST00000468358 CEPT1Q9Y6K0 416 aa13.44□□□□□ -0.26
CLDN11-202ENST00000468358 DPPA5A6NC42 116 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 OR9G9P0C7N8 305 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 PGAM2P15259 253 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 F2RP25116 425 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 ERVK-16P61578 105 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 RPL8P62917 257 aaKnown RBP13.43□□□□□ -0.26
CLDN11-202ENST00000468358 MRPS10P82664 201 aaKnown RBP13.43□□□□□ -0.26
CLDN11-202ENST00000468358 DEFA5Q01523 94 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 FHL3Q13643 280 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 REC114Q7Z4M0 266 aa13.43□□□□□ -0.26
CLDN11-202ENST00000468358 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 A0A087WW49 117 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 A0A0G2JLM5 398 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 SEC14L6B5MCN3 397 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 LINC01619G3V211 115 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 TBPP20226 339 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 MAS1LP35410 378 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 LPAR6P43657 344 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 TAS2R19P59542 299 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 SLC38A6Q8IZM9 456 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
CLDN11-202ENST00000468358 SLIRPQ9GZT3 109 aaKnown RBP13.42□□□□□ -0.26
CLDN11-202ENST00000468358 PLEKHA2Q9HB19 425 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
CLDN11-202ENST00000468358 BET1LQ9NYM9 111 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 COMMD9Q9P000 198 aa13.42□□□□□ -0.26
CLDN11-202ENST00000468358 HMX3A6NHT5 357 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 RAB3DO95716 219 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 PPP5CP53041 499 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 SLURP1P55000 103 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 C9orf66Q5T8R8 295 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 TMEM229BQ8NBD8 167 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
CLDN11-202ENST00000468358 OR4A5Q8NH83 315 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 MRAPQ8TCY5 172 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 RSRP1Q9BUV0 290 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 TMEM140Q9NV12 185 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 RABL2AQ9UBK7 228 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-202ENST00000468358 RABL2BQ9UNT1 228 aa13.41□□□□□ -0.26
CLDN11-202ENST00000468358 ANKRD34BA5PLL1 514 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 PRH1P02810 166 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 HSPB1P04792 205 aaKnown RBP13.4□□□□□ -0.26
CLDN11-202ENST00000468358 MYOD1P15172 320 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 HLA-GP17693 338 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 UCP3P55916 312 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 SSBP1Q04837 148 aaKnown RBP13.4□□□□□ -0.26
CLDN11-202ENST00000468358 STEAP1BQ6NZ63 245 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 TBC1D26Q86UD7 250 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 SLC25A42Q86VD7 318 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 SMIM4Q8WVI0 70 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 DCUN1D4Q92564 292 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 COMMD5Q9GZQ3 224 aa13.4□□□□□ -0.26
CLDN11-202ENST00000468358 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.26
CLDN11-202ENST00000468358 TRAV3A0A0B4J244 114 aa13.39□□□□□ -0.27
CLDN11-202ENST00000468358 MARCH11A6NNE9 402 aa13.39□□□□□ -0.27
CLDN11-202ENST00000468358 UPK2O00526 184 aa13.39□□□□□ -0.27
CLDN11-202ENST00000468358 OVOL1O14753 267 aa13.39□□□□□ -0.27
CLDN11-202ENST00000468358 KRASP01116 189 aa13.39□□□□□ -0.27
CLDN11-202ENST00000468358 IL6RP08887 468 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-202ENST00000468358 POU2AF1Q16633 256 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms