RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 C8orf46Q8TAG6 207 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 ASB13Q8WXK3 278 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 RBMXL1Q96E39 390 aaKnown RBP6.76□□□□□ -1.33
BRCA1-208ENST00000468300 RNF126Q9BV68 326 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 GGACTQ9BVM4 153 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 NMES1Q9C002 83 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 RPUSD1Q9UJJ7 312 aaKnown RBP6.76□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF469Q96JG9 3925 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-208ENST00000468300 YLPM1P49750 1951 aaKnown RBP6.76□□□□□ -1.33
BRCA1-208ENST00000468300 CELSR1Q9NYQ6 3014 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 NDUFB3O43676 98 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 LRRC10Q5BKY1 277 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 SP5Q6BEB4 398 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM88Q6PEY1 159 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 CCDC71LQ8N9Z2 235 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 PSG11Q9UQ72 335 aa6.76□□□□□ -1.33
BRCA1-208ENST00000468300 TRAV26-1A0A087WT03 109 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 A0A1W2PPE3 182 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 hADV38S2A0JD32 116 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 KIAA1324LA8MWY0 1029 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-208ENST00000468300 RAMP3O60896 148 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 RGS11O94810 467 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 HOXB5P09067 269 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 DNASE1P24855 282 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 AKR1C3P42330 323 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 GAMTQ14353 236 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 NMSQ5H8A3 153 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 BTNL3Q6UXE8 466 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 HEPN1Q6WQI6 88 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 PPP1R1CQ8WVI7 109 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 NRGNQ92686 78 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 FAM110AQ9BQ89 295 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 HEXA-AS1Q9H8Q6 139 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 A1L4Q6 167 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 C17orf98A8MV24 154 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 PPBPP02775 128 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 P0C879 139 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 LYL1P12980 280 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 MFAP4P55083 255 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 DLX1P56177 255 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 RPL39P5Q59GN2 51 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 WDR25Q64LD2 544 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-208ENST00000468300 PUSL1Q8N0Z8 303 aaKnown RBP6.75□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF525Q8N782 197 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 DDB2Q92466 427 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 ZNF714Q96N38 554 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 LPAR3Q9UBY5 353 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 PPIHO43447 177 aaKnown RBP6.75□□□□□ -1.33
BRCA1-208ENST00000468300 ZP3P21754 424 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 PAX2Q02962 417 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 SLC25A48Q6ZT89 311 aaKnown RBP6.75□□□□□ -1.33
BRCA1-208ENST00000468300 OR51H1Q8NH63 302 aa6.75□□□□□ -1.33
BRCA1-208ENST00000468300 DOCK11Q5JSL3 2073 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 C13orf42A0A1B0GVH6 325 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 ZFP36P26651 326 aaKnown RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 COL8A1P27658 744 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 RPL19P84098 196 aaKnown RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM268Q5VZI3 342 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 UQCC3Q6UW78 93 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 Q6ZRM9 215 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 TMEM144Q7Z5S9 345 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 CMTM1Q8IZ96 169 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 Q8N7P7 452 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 OR4D5Q8NGN0 318 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 H1FXQ92522 213 aaKnown RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 C2orf50Q96LR7 162 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 C11orf1Q9H5F2 150 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 PATZ1Q9HBE1 687 aaKnown RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 SAA2-SAA4A0A096LPE2 208 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 TRBV7-9A0A0J9YWB2 115 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 MPC2O95563 127 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 SAA2P0DJI9 122 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 SLC25A4P12235 298 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 DUTP33316 252 aaKnown RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 C11orf87Q6NUJ2 197 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 GSG1LQ6UXU4 331 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 LGI3Q8N145 548 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 LINC00052Q96N35 136 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 ABHD14AQ9BUJ0 271 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 GNG12Q9UBI6 72 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 KCNS2Q9ULS6 477 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 ARHGAP32A7KAX9 2087 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 PET100P0DJ07 73 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 IGHV1-8P0DP01 117 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 PAX1P15863 534 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 KRTAP10-9P60411 292 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 IL22RA2Q969J5 263 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 NEIL1Q96FI4 390 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-208ENST00000468300 OR5AC2Q9NZP5 309 aa6.74□□□□□ -1.33
BRCA1-208ENST00000468300 A0A1W2PRX2 142 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 RNF222A6NCQ9 220 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 VWC2LB2RUY7 222 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 PITX3O75364 302 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 LMO4P61968 165 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 RAB32Q13637 225 aa6.73□□□□□ -1.33
BRCA1-208ENST00000468300 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms