RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 RPEL1Q2QD12 228 aa11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 CMTM3Q96MX0 182 aa11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 TAS2R8Q9NYW2 309 aa11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 NDUFA13Q9P0J0 144 aa11.21□□□□□ -0.61
ATPAF2-204ENST00000467560 TRAV18A0A075B6X5 111 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 A0A0A6YYH2 397 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 A6NJ64 397 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 A8MZ25 164 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 PPP5D1E7EU14 171 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 TNFSF12O43508 249 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 OR2J3O76001 311 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 HLA-AP01891 365 aaKnown RBP11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 TGFBR1P36897 503 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 VBP1P61758 197 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 NCS1P62166 190 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 MMD2Q8IY49 270 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 PUSL1Q8N0Z8 303 aaKnown RBP11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 TCTEX1D2Q8WW35 142 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 CCL28Q9NRJ3 127 aa11.2□□□□□ -0.62
ATPAF2-204ENST00000467560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 KBTBD11O94819 623 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 OR2A4O95047 310 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 AREGP15514 252 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 RORCP51449 518 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 LSM3P62310 102 aaKnown RBP11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 IDNKQ5T6J7 187 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 CLVS1Q8IUQ0 354 aaPredicted RBP11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 TMEM167AQ8TBQ9 72 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 AP3S1Q92572 193 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 SNAPC3Q92966 411 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 SPIN2AQ99865 258 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 SPIN2BQ9BPZ2 258 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 PRELID3BQ9Y3B1 194 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 S4R3C0 116 aa11.19□□□□□ -0.62
ATPAF2-204ENST00000467560 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 CGB1A6NKQ9 187 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 ACTL6BO94805 426 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 NDUFB8O95169 186 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 FCGR2CP31995 323 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 HAGHQ16775 308 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 C15orf32Q32M92 178 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 SSX9Q7RTT3 188 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 SGPP2Q8IWX5 399 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 NECAP1Q8NC96 275 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 BEST4Q8NFU0 473 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 OR4S2Q8NH73 311 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 FANCD2OSQ96PS1 177 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 FYTTD1Q96QD9 318 aaKnown RBP11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 OR2A7Q96R45 310 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 CITED4Q96RK1 184 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 HSD17B10Q99714 261 aaKnown RBP11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 NAA50Q9GZZ1 169 aaKnown RBP11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 ZMAT4Q9H898 229 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 EDA2RQ9HAV5 297 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 MRPS7Q9Y2R9 242 aaKnown RBP11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 SELENOKQ9Y6D0 94 aa11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
ATPAF2-204ENST00000467560 H0Y980 276 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 SLC22A5O76082 557 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 ZNF735P0CB33 412 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 ZNF182P17025 639 aaPredicted RBP11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 CD300EQ496F6 205 aaPredicted RBP11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 SECTM1Q8WVN6 248 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 ISOC1Q96CN7 298 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 AUNIPQ9H7T9 357 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 FBXL7Q9UJT9 491 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
ATPAF2-204ENST00000467560 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 ZNF785A8K8V0 405 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 NPIPB5A8MRT5 1133 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 OR2C1O95371 312 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 PPYP01298 95 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 REG1AP05451 166 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 RPL27AP46776 148 aaKnown RBP11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 ARPC4P59998 168 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 TATDN3Q17R31 274 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 ZFAND6Q6FIF0 208 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 MZT2AQ6P582 158 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 Q8N402 240 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 RBM38Q9H0Z9 239 aaKnown RBP11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 SLC2A9Q9NRM0 540 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 CCDC59Q9P031 241 aaKnown RBP11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 ZNF257Q9Y2Q1 563 aa11.16□□□□□ -0.62
ATPAF2-204ENST00000467560 PLECQ15149 4684 aaKnown RBP11.15□□□□□ -0.62
ATPAF2-204ENST00000467560 H3BMQ9 156 aa11.15□□□□□ -0.62
ATPAF2-204ENST00000467560 SULT1C2O00338 296 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms