RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RPL13AP3Q6NVV1 102 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 CEMP1Q6PRD7 247 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-207ENST00000467273 ACOT7LQ6ZUV0 252 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 AHSA2Q719I0 299 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 TRAPPC6BQ86SZ2 158 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 CROCCP2Q86T23 111 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 ERI1Q8IV48 349 aaKnown RBP4.11□□□□□ -1.75
PTCD3-207ENST00000467273 Q8IYB0 196 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 PXT1Q8NFP0 134 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 OR9G1Q8NH87 305 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 HAVCR2Q8TDQ0 301 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 DLX4Q92988 240 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-207ENST00000467273 ISOC2Q96AB3 205 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 CXorf58Q96LI9 332 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 TSC22D3Q99576 134 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 ZNF286AQ9HBT8 521 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 DNAJC27Q9NZQ0 273 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 ENPP4Q9Y6X5 453 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 V9GYY9 64 aa4.11□□□□□ -1.75
PTCD3-207ENST00000467273 TNCP24821 2201 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 A0A1W2PP11 408 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 PQLC2LA1A4F0 135 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TVP23AA6NH52 213 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 FAM183AA6NL82 134 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 DHRS7CA6NNS2 312 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 NCBP2LA6PVI3 153 aaKnown RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 FAM220BPB1ANY3 271 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 H3BTX0 84 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 NUPL2O15504 423 aaKnown RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TGOLN2O43493 480 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 SYT7O43581 403 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 MMP23AO75900 390 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TMEM50AO95807 157 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 NRASP01111 189 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 IGKV1D-33P01593 117 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 IGKV1-33P01594 117 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 PPBPP02775 128 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 CSN2P05814 226 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 CDK1P06493 297 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 H2BFMP0C1H6 154 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 HOXA1P49639 335 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 FGF8P55075 233 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TMEM50BP56557 158 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 SMIM11AP58511 58 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 GNB1P62873 340 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 MFGE8Q08431 387 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 ZNF816Q0VGE8 651 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 EDDM3AQ14507 147 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 PTGES3Q15185 160 aaKnown RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 SLC22A6Q4U2R8 563 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TRIQKQ629K1 86 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 LPCAT4Q643R3 524 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 C8orf82Q6P1X6 216 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 HACD2Q6Y1H2 254 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 SSX7Q7RTT5 188 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TMEM17Q86X19 198 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 Q8N6K4 173 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 Q8N9W7 124 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 OR2T12Q8NG77 320 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 OR2T10Q8NGZ9 312 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TMEM37Q8WXS4 190 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 ARPC1AQ92747 370 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 FLYWCH2Q96CP2 140 aaKnown RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 ZNF488Q96MN9 340 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 KCTD7Q96MP8 289 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 RASL11BQ9BPW5 248 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 NABP2Q9BQ15 211 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 GNB4Q9HAV0 340 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 GSN-AS1Q9NRJ2 163 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 SLC2A9Q9NRM0 540 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 TAS2R1Q9NYW7 299 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 RCC2Q9P258 522 aaKnown RBP4.1□□□□□ -1.75
PTCD3-207ENST00000467273 PEX16Q9Y5Y5 336 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 WSB1Q9Y6I7 421 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 KIAA2026Q5HYC2 2103 aa4.1□□□□□ -1.75
PTCD3-207ENST00000467273 ABCA13Q86UQ4 5058 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TEX13DA0A0J9YY54 714 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 PPP1R2P9O14990 202 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TCAPO15273 167 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 DEDDO75618 318 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 DHRS3O75911 302 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GAGE7O76087 117 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 CNIH1O95406 144 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TSPAN13O95857 204 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 IGLV3-1P01715 115 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 LGALS1P09382 135 aaKnown RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GAGE12FP0CL80 117 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GAGE12GP0CL81 117 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GAGE12IP0CL82 117 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 H2AFXP16104 143 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GABRR1P24046 479 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 IFNGR2P38484 337 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 TCTAP57738 103 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 LINC00205P59089 165 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 EWSR1Q01844 656 aaKnown RBP eCLIP4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GAGE1Q13065 139 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 GAGE4Q13068 117 aa4.09□□□□□ -1.75
PTCD3-207ENST00000467273 RAB31Q13636 194 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms