RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 LAMB4A4D0S4 1761 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 RP1P56715 2156 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 SETD5Q9C0A6 1442 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 TRAPPC2LH3BP13 241 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 COX7A2LO14548 114 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 TOX3O15405 576 aaPredicted RBP0.57□□□□□ -2.32
SMC4-207ENST00000467263 SCN2BO60939 215 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 IL6P05231 212 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 FAM19A2Q8N3H0 131 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 ANKRD36BP1Q96IX9 119 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 CCL13Q99616 98 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 CD300AQ9UGN4 299 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 CFAP45Q9UL16 551 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 ALPK2Q86TB3 2170 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 GLI3P10071 1580 aa0.57□□□□□ -2.32
SMC4-207ENST00000467263 SMARCA4P51532 1647 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 TEX50A0A1B0GTY4 177 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 FTCDNL1E5RQL4 147 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 K7ERQ8 282 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 GEMIN2O14893 280 aaKnown RBP0.56□□□□□ -2.32
SMC4-207ENST00000467263 NSA2O95478 260 aaKnown RBP0.56□□□□□ -2.32
SMC4-207ENST00000467263 ORM1P02763 201 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 UBBP0CG47 229 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 HIST1H1CP16403 213 aaKnown RBP0.56□□□□□ -2.32
SMC4-207ENST00000467263 MSNP26038 577 aaKnown RBP0.56□□□□□ -2.32
SMC4-207ENST00000467263 PMS2P3Q13401 168 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 EBPQ15125 230 aaKnown RBP0.56□□□□□ -2.32
SMC4-207ENST00000467263 ANGPT1Q15389 498 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 C10orf55Q5SWW7 151 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 OR8B3Q8NGG8 313 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 GNPNAT1Q96EK6 184 aaPredicted RBP0.56□□□□□ -2.32
SMC4-207ENST00000467263 MS4A6AQ9H2W1 248 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 HRASLSQ9HDD0 168 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 TIMM22Q9Y584 194 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 SNURFQ9Y675 71 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 GMEB1Q9Y692 573 aa0.56□□□□□ -2.32
SMC4-207ENST00000467263 NEMFO60524 1076 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 APOMO95445 188 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 CD40LGP29965 261 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 HADHBP55084 474 aaKnown RBP0.55□□□□□ -2.32
SMC4-207ENST00000467263 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.55□□□□□ -2.32
SMC4-207ENST00000467263 SLC22A4Q9H015 551 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 CXorf21Q9HAI6 301 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 LHFPL6Q9Y693 200 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 EXPH5Q8NEV8 1989 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 KIF24Q5T7B8 1368 aa0.55□□□□□ -2.32
SMC4-207ENST00000467263 A0A1B0GW54 56 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 TMEM212A6NML5 194 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 YKT6O15498 198 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 PET100P0DJ07 73 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 SLC22A24Q8N4F4 322 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 ZNF676Q8N7Q3 588 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 OR5B17Q8NGF7 314 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 OR2T27Q8NH04 317 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 ASB13Q8WXK3 278 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 OR52A5Q9H2C5 316 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 HES4Q9HCC6 221 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 PRELID1Q9Y255 219 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 TONSLQ96HA7 1378 aa0.54□□□□□ -2.32
SMC4-207ENST00000467263 SDCBPO00560 298 aaPredicted RBP0.53□□□□□ -2.32
SMC4-207ENST00000467263 LEPROTO15243 131 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 NDUFS6O75380 124 aaKnown RBP0.53□□□□□ -2.32
SMC4-207ENST00000467263 HAAOP46952 286 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 DNM1P34Q6PK57 102 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 SBSNQ6UWP8 590 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 UBL4BQ8N7F7 174 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 ZNF565Q8N9K5 539 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 DERL2Q9GZP9 239 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 EURLQ9NYK6 297 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 COQ4Q9Y3A0 265 aa0.53□□□□□ -2.32
SMC4-207ENST00000467263 TINCRA0A1B0GVN0 87 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 MSMBP08118 114 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 RNASE3P12724 160 aaKnown RBP0.52□□□□□ -2.33
SMC4-207ENST00000467263 CXCR4P61073 352 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 SSX8Q7RTT4 187 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 DHFR2Q86XF0 187 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 TBC1D19Q8N5T2 526 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 SGMS2Q8NHU3 365 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 HAVCR2Q8TDQ0 301 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 EEF1AKMT1Q8WVE0 214 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 ERMAPQ96PL5 475 aaPredicted RBP0.52□□□□□ -2.33
SMC4-207ENST00000467263 BBS2Q9BXC9 721 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 XAGE1AQ9HD64 81 aa0.52□□□□□ -2.33
SMC4-207ENST00000467263 TRBV10-2A0A0K0K1G8 114 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 TRPC5OSA6NMA1 111 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 ITGB1BP1O14713 200 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 HLA-DMBP28068 263 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 CSN1S1P47710 185 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 RAB13P51153 203 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 CCDC88AQ3V6T2 1871 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 CD302Q8IX05 232 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 SYCE1Q8N0S2 351 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 ZNF439Q8NDP4 499 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 PACRGQ96M98 296 aaPredicted RBP0.51□□□□□ -2.33
SMC4-207ENST00000467263 SERPINI1Q99574 410 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 OR8D2Q9GZM6 311 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 GPR84Q9NQS5 396 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 ANAPC10Q9UM13 185 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
SMC4-207ENST00000467263 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms