RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 NPYP01303 97 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 KCNE1P15382 129 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 HOXA6P31267 233 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 XCL1P47992 114 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 FXYD7P58549 80 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 PSME3P61289 254 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 CTAG1AP78358 180 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 CCL7P80098 99 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 ACOT6Q3I5F7 207 aaPredicted RBP1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 LRRC25Q8N386 305 aaPredicted RBP1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 TBC1D19Q8N5T2 526 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 SMCR5Q8TEV8 140 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 ROPN1LQ96C74 230 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 DCUN1D1Q96GG9 259 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 PPP1R2P1Q96PQ5 205 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 TTTY13Q9BZ97 58 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 PSORS1C2Q9UIG4 136 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 PKIGQ9Y2B9 76 aa1.76□□□□□ -2.13
PRPF40A-205ENST00000467114 DCCP43146 1447 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 LTBP2Q14767 1821 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 ABCC12Q96J65 1359 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 C3orf84H3BNL1 204 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 PSMD12O00232 456 aaPredicted RBP1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 GNRH2O43555 120 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 IFNA6P05013 189 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 CD24P25063 80 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 FUSP35637 526 aaKnown RBP eCLIP1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 RAB13P51153 203 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 POLR2GP62487 172 aaKnown RBP eCLIP1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 MRPS25P82663 173 aaKnown RBP1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 C20orf196Q8IYI0 205 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 KLK6Q92876 244 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 PRAP1Q96NZ9 151 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 ULBP3Q9BZM4 244 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 PSTPIP2Q9H939 334 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 CMTM6Q9NX76 183 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 CCL26Q9Y258 94 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF337Q9Y3M9 751 aa1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 DICER1Q9UPY3 1922 aaKnown RBP1.75□□□□□ -2.13
PRPF40A-205ENST00000467114 SMIM9A6NGZ8 99 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 KNCNA6PVL3 124 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 I3L521 148 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 BHLHE40O14503 412 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF705DP0CH99 300 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF728P0DKX0 622 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 HIST1H1TP22492 207 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 CCR2P41597 374 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 OR4D2P58180 307 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 BASP1P80723 227 aaKnown RBP1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 SPA17Q15506 151 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 GRK1Q15835 563 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 GUK1Q16774 197 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 AKIRIN2Q53H80 203 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 GLT8D1Q68CQ7 371 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 SSX8Q7RTT4 187 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 SLC35F6Q8N357 371 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 OR4X1Q8NH49 305 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF675Q8TD23 568 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF471Q9BX82 626 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 PAQR5Q9NXK6 330 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 FAM215AQ9Y5M1 114 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 GRIN2BQ13224 1484 aa1.74□□□□□ -2.13
PRPF40A-205ENST00000467114 A0A087WUJ7 227 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF189O75820 626 aaPredicted RBP1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 NSA2O95478 260 aaKnown RBP1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 SRP19P09132 144 aaKnown RBP1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 UCHL1P09936 223 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 S100A7P31151 101 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 CSN1S1P47710 185 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 ERVS71-1P61550 626 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 AP1S1P61966 158 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 AKR1C1Q04828 323 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 EDDM3AQ14507 147 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 MIAQ16674 131 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF767PQ75MW2 155 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 OR5B17Q8NGF7 314 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 GLTPQ9NZD2 209 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 RSL24D1Q9UHA3 163 aaKnown RBP1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 FBXO5Q9UKT4 447 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 MYO16Q9Y6X6 1858 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 NUP160Q12769 1436 aa1.73□□□□□ -2.13
PRPF40A-205ENST00000467114 FLT4P35916 1363 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 TRBV20OR9-2A0A075B6H5 130 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 TRGV5A0A0B4J1U4 118 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 MUC21A0A0G2JKD1 596 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 MUC21A0A140T8X8 626 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 PQLC2LA1A4F0 135 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 C2orf74A8MZ97 194 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 FNDC10F2Z333 226 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 HLA-DRB1P01911 266 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 TTRP02766 147 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 BPGMP07738 259 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 HSD11B1P28845 292 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 CA5AP35218 305 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 KCNJ8Q15842 424 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 ZNF181Q2M3W8 571 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 AGTRAPQ6RW13 159 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 Q6ZS52 159 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 LHFPL1Q86WI0 220 aa1.72□□□□□ -2.13
PRPF40A-205ENST00000467114 DGCR14Q96DF8 476 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms