RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 C20orf204Q6ZNR8 217 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 OR10G8Q8NGN5 311 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 RDH5Q92781 318 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 TMEM45BQ96B21 275 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 IGKV1D-13A0A0B4J2D9 117 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 C17orf112F2Z3M2 114 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 IGKV1-13P0DP09 117 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 IAPPP10997 89 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 OR10J3Q5JRS4 329 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 UBALD1Q8TB05 177 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 MEGF9Q9H1U4 602 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 GNB4Q9HAV0 340 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 IL36GQ9NZH8 169 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 SMG1Q96Q15 3661 aaKnown RBP15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 S1PR2O95136 353 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 TNFSF15O95150 251 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 MEOX1P50221 254 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 ACSM6Q6P461 480 aa15.13■□□□□ 0.01
SNAPC3-205ENST00000467062 CNOT1A5YKK6 2376 aaKnown RBP15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 SP9P0CG40 484 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 PMCHP20382 165 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 S100GP29377 79 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 GNB1P62873 340 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 ZDHHC23Q8IYP9 409 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 OR4F17Q8NGA8 305 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 BORCS7Q96B45 105 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 IL36BQ9NZH7 164 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 CORTO00230 105 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 RHBDL1O75783 438 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 WISP2O76076 250 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 SLC38A11Q08AI6 406 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 SMIM21Q3B7S5 101 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 RNFT1Q5M7Z0 435 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 OR52L2PQ8NGH6 319 aa15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 MAP1BP46821 2468 aaKnown RBP15.12■□□□□ 0.01
SNAPC3-205ENST00000467062 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 A0A1W2PS18 150 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 CD300LBA8K4G0 201 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 RBFOX2O43251 390 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 NDUFB4O95168 129 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 MT-CO3P00414 261 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 COX5AP20674 150 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 ARG2P78540 354 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 CEACAM21Q3KPI0 293 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 POM121L2Q96KW2 1035 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 PCNX2A6NKB5 2137 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 MGAQ8IWI9 3026 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 COL27A1Q8IZC6 1860 aaPredicted RBP15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 IGKV1-6A0A0C4DH72 117 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 GAGE12BA1L429 117 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 SNURFLB1AK76 121 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 SIRPB1O00241 398 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 CA6P23280 308 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 TIMP3P35625 211 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 ARR3P36575 388 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 HOXA4Q00056 320 aaPredicted RBP15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 CCL28Q9NRJ3 127 aa15.11■□□□□ 0.01
SNAPC3-205ENST00000467062 DOCK11Q5JSL3 2073 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 TRAV9-2A0A087WT02 112 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 LOC102724200A0A096LPH7 203 aaPredicted RBP15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 TRAPPC2LH3BP13 241 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 TAX1BP3O14907 124 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 ZNF324O75467 553 aaPredicted RBP15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 SERPINE2P07093 398 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 CD46P15529 392 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 IER3P46695 156 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 PMP22Q01453 160 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 APOBEC3DQ96AK3 386 aaPredicted RBP15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 GNB1LQ9BYB4 327 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 KCNIP2Q9NS61 270 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 DCHS1Q96JQ0 3298 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 SLC22A20A6NK97 555 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 NAPSAO96009 420 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 SP1P08047 785 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 RIPPLY3P57055 190 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 FAM71F2Q6NXP2 309 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 VWA1Q6PCB0 445 aa15.1■□□□□ 0.01
SNAPC3-205ENST00000467062 FGF12P61328 243 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 MRPL49Q13405 166 aaKnown RBP15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 KRTCAP3Q53RY4 240 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 SPANXN5Q5MJ07 72 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 ZNF114Q8NC26 417 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 IL1F10Q8WWZ1 152 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 LINC00470Q9BZP3 86 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 PGLYRP1O75594 196 aaPredicted RBP15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 CELA3BP08861 270 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 CTXN2P0C2S0 81 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 EGR1P18146 543 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 F2RP25116 425 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 IZUMO4Q1ZYL8 232 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 HES3Q5TGS1 186 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 AMMECR1LQ6DCA0 310 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 OR4P4Q8NGL7 312 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 ABI3Q9P2A4 366 aa15.09■□□□□ 0.01
SNAPC3-205ENST00000467062 SVILO95425 2214 aa15.08■□□□□ 0.01
SNAPC3-205ENST00000467062 RAMP3O60896 148 aa15.08■□□□□ 0
SNAPC3-205ENST00000467062 MT-ND6P03923 174 aa15.08■□□□□ 0
SNAPC3-205ENST00000467062 ZNF83P51522 516 aa15.08■□□□□ 0
SNAPC3-205ENST00000467062 PLP2Q04941 152 aa15.08■□□□□ 0
SNAPC3-205ENST00000467062 SRSF6Q13247 344 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms