RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 C22orf46C9J442 243 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 EIF3GO75821 320 aaKnown RBP eCLIP15.23■□□□□ 0.03
CAPN3-209ENST00000466222 ZFP36P26651 326 aaKnown RBP15.23■□□□□ 0.03
CAPN3-209ENST00000466222 HBG1P69891 147 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 HBG2P69892 147 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 CLDND2Q8NHS1 167 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 FAM168AQ92567 244 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 YPEL4Q96NS1 127 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 SIRT7Q9NRC8 400 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 GNG12Q9UBI6 72 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 A0A1W2PPE2 198 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 A0A1W2PPE3 182 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 CXorf65A6NEN9 183 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 H3BQ15 152 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 S100A9P06702 114 aaKnown RBP15.23■□□□□ 0.03
CAPN3-209ENST00000466222 ZNF134P52741 427 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 GNB2P62879 340 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 RUNX1Q01196 453 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 MEF2CQ06413 473 aaPredicted RBP15.23■□□□□ 0.03
CAPN3-209ENST00000466222 SLC35E3Q7Z769 313 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 FAM24BQ8N5W8 94 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 C10orf105Q8TEF2 133 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 ZNRD1Q9P1U0 126 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 CACNG5Q9UF02 275 aa15.23■□□□□ 0.03
CAPN3-209ENST00000466222 NAV2Q8IVL1 2488 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 F2RL2O00254 374 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 IGKV1-39P01597 117 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 IGLV2-14P01704 120 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 IGKV1D-39P04432 117 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 SERF2P84101 59 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 HTD2P86397 168 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 TRAT1Q6PIZ9 186 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 THNSL2Q86YJ6 484 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 C11orf42Q8N5U0 333 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 TVP23CQ96ET8 276 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 ZNF714Q96N38 554 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 PSENENQ9NZ42 101 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 RPUSD1Q9UJJ7 312 aaKnown RBP15.22■□□□□ 0.03
CAPN3-209ENST00000466222 RBM7Q9Y580 266 aaKnown RBP15.22■□□□□ 0.03
CAPN3-209ENST00000466222 RFNGQ9Y644 331 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 UNC79Q9P2D8 2635 aa15.22■□□□□ 0.03
CAPN3-209ENST00000466222 LOC102723971A0A1B0GUV8 181 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 B4DEV8 164 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 SLC31A2O15432 143 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 NXPH3O95157 252 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 ARG1P05089 322 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 LMO4P61968 165 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 CTAG1AP78358 180 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 MSMO1Q15800 293 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 HAGHQ16775 308 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 MORN2Q502X0 79 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 NINJ1Q92982 152 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 NIPSNAP3BQ9BS92 247 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 SSBP3Q9BWW4 388 aaPredicted RBP15.21■□□□□ 0.03
CAPN3-209ENST00000466222 KIAA2026Q5HYC2 2103 aa15.21■□□□□ 0.03
CAPN3-209ENST00000466222 IGHV4-61A0A0C4DH41 118 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 ZNF729A6NN14 1252 aaPredicted RBP15.21■□□□□ 0.02
CAPN3-209ENST00000466222 ST8SIA5O15466 376 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 DLX6P56179 175 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 UBE2KP61086 200 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 CLEC2AQ6UVW9 174 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 HEPN1Q6WQI6 88 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 ZNF429Q86V71 674 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 MBD3L1Q8WWY6 194 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 RAB39BQ96DA2 213 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 LINC00574Q9H8X3 128 aa15.21■□□□□ 0.02
CAPN3-209ENST00000466222 PPIAL4CA0A0B4J2A2 164 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 hCG_1809904A0A1W2PP81 198 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 A0A1W2PR64 198 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 A0A1W2PRV1 198 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 IGKV1-5P01602 117 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 PPIAL4GP0DN37 164 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 TMEM267Q0VDI3 215 aaPredicted RBP15.2■□□□□ 0.02
CAPN3-209ENST00000466222 Q6ZRM9 215 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 PINX1Q96BK5 328 aaKnown RBP15.2■□□□□ 0.02
CAPN3-209ENST00000466222 C5orf30Q96GV9 206 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 AGMATQ9BSE5 352 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 IDI2-AS1Q9NZ38 188 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 KCNS2Q9ULS6 477 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 PSG11Q9UQ72 335 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 MMP24Q9Y5R2 645 aa15.2■□□□□ 0.02
CAPN3-209ENST00000466222 AP4M1O00189 453 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 PAX1P15863 534 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 TAGLN2P37802 199 aaKnown RBP15.19■□□□□ 0.02
CAPN3-209ENST00000466222 GNG10P50151 68 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 LINC00205P59089 165 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 LCN2P80188 198 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 LRRC75BQ2VPJ9 315 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 ZNF585BQ52M93 769 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 TCTEX1D2Q8WW35 142 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 PIMREGQ9BSJ6 248 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 TOLLIPQ9H0E2 274 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 GFOD1Q9NXC2 390 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 MALRD1Q5VYJ5 2156 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 VWC2LB2RUY7 222 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 PNRC1Q12796 327 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-209ENST00000466222 TCTEX1D1Q8N7M0 179 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 CYB561D1Q8N8Q1 229 aa15.19■□□□□ 0.02
CAPN3-209ENST00000466222 P2RX4Q99571 388 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms