RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 H7BYZ3 331 aa13.52□□□□□ -0.24
SLX4-202ENST00000466154 PPP1R2P9O14990 202 aa13.52□□□□□ -0.24
SLX4-202ENST00000466154 FABP4P15090 132 aa13.52□□□□□ -0.24
SLX4-202ENST00000466154 CDPF1Q6NVV7 123 aa13.52□□□□□ -0.24
SLX4-202ENST00000466154 ZNF251Q9BRH9 671 aa13.52□□□□□ -0.24
SLX4-202ENST00000466154 SAA2-SAA4A0A096LPE2 208 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 MBD3L4A6NDZ8 208 aaPredicted RBP13.52□□□□□ -0.25
SLX4-202ENST00000466154 MBD3L3A6NE82 208 aaPredicted RBP13.52□□□□□ -0.25
SLX4-202ENST00000466154 MBD3L5A6NJ08 208 aaPredicted RBP13.52□□□□□ -0.25
SLX4-202ENST00000466154 MBP02144 154 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 SAA2P0DJI9 122 aaPredicted RBP13.52□□□□□ -0.25
SLX4-202ENST00000466154 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 FAM90A1Q86YD7 464 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 MBD3L2Q8NHZ7 208 aaPredicted RBP13.52□□□□□ -0.25
SLX4-202ENST00000466154 OR5B12Q96R08 314 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 DERL1Q9BUN8 251 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 IFI27L2Q9H2X8 130 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 JPT1Q9UK76 154 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 DSCAMO60469 2012 aa13.52□□□□□ -0.25
SLX4-202ENST00000466154 P2RX4Q99571 388 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 TCEAL7Q9BRU2 100 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 MS4A5Q9H3V2 200 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 ENY2Q9NPA8 101 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 B4DEV8 164 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 MMP23AO75900 390 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 ACTL6BO94805 426 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 LOXL3P58215 753 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 RPL23P62829 140 aaKnown RBP13.51□□□□□ -0.25
SLX4-202ENST00000466154 CT45A1Q5HYN5 189 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 C1orf185Q5T7R7 199 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 OR13D1Q8NGV5 346 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 CT45A3Q8NHU0 189 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
SLX4-202ENST00000466154 SOD3P08294 240 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 GLRXP35754 106 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 GALR1P47211 349 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 REG1BP48304 166 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 S100A12P80511 92 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 MRPS11P82912 194 aaKnown RBP13.51□□□□□ -0.25
SLX4-202ENST00000466154 TRAT1Q6PIZ9 186 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 ABHD5Q8WTS1 349 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 GCM1Q9NP62 436 aa13.51□□□□□ -0.25
SLX4-202ENST00000466154 CXorf65A6NEN9 183 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 TM4SF5O14894 197 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 KBTBD11O94819 623 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 IRF2P14316 349 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 GGACTQ9BVM4 153 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 RNF7Q9UBF6 113 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 TCF19Q9Y242 345 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 TIMM9Q9Y5J7 89 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 IFITM10A6NMD0 228 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 NDUFB4O95168 129 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 HOXA5P20719 270 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 SPCS3P61009 180 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 PCGF1Q9BSM1 259 aa13.5□□□□□ -0.25
SLX4-202ENST00000466154 FAM3BP58499 235 aaPredicted RBP13.49□□□□□ -0.25
SLX4-202ENST00000466154 C1QL4Q86Z23 238 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 A0A1B0GV90 55 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 YPEL1O60688 119 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 IGHV1-46P01743 117 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 CISD2Q8N5K1 135 aaKnown RBP13.49□□□□□ -0.25
SLX4-202ENST00000466154 NEIL1Q96FI4 390 aaPredicted RBP13.49□□□□□ -0.25
SLX4-202ENST00000466154 YPEL2Q96QA6 119 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 SEBOXQ9HB31 216 aaPredicted RBP13.49□□□□□ -0.25
SLX4-202ENST00000466154 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 ARL14EPLP0DKL9 152 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 CDX1P47902 265 aaPredicted RBP13.49□□□□□ -0.25
SLX4-202ENST00000466154 TREML4Q6UXN2 200 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 OR4S2Q8NH73 311 aa13.49□□□□□ -0.25
SLX4-202ENST00000466154 H1FXQ92522 213 aaKnown RBP13.49□□□□□ -0.25
SLX4-202ENST00000466154 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
SLX4-202ENST00000466154 CYP2G1PQ6ZSU1 146 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 TMEM37Q8WXS4 190 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 TACC2O95359 2948 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 GNB2P62879 340 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 RELBQ01201 579 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 C17orf58Q2M2W7 97 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 OR4A47Q6IF82 309 aa13.48□□□□□ -0.25
SLX4-202ENST00000466154 RBMXL3Q8N7X1 1067 aaKnown RBP13.48□□□□□ -0.25
SLX4-202ENST00000466154 PYY3Q5JQD4 70 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 MOB3BQ86TA1 216 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 CCL17Q92583 94 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 MANBALQ9NQG1 85 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 KBTBD11-OT1A0A1B0GTJ5 212 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 PPP5D1E7EU14 171 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 TNFSF4P23510 183 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 CD40P25942 277 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 MAS1LP35410 378 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 TCTEX1D1Q8N7M0 179 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 OR10A7Q8NGE5 316 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 MGST2Q99735 147 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 WDR83OSQ9Y284 106 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 TP53TG5Q9Y2B4 290 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 GFRA3O60609 400 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 IGKV1-16P04430 117 aa13.47□□□□□ -0.25
SLX4-202ENST00000466154 PRB3Q04118 309 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms