RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 ARPC4P59998 168 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 KLK9Q2XQG4 91 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 C15orf32Q32M92 178 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 HOGA1Q86XE5 327 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 LAX1Q8IWV1 398 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 VKORC1L1Q8N0U8 176 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 ZBTB34Q8NCN2 500 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 SLC25A38Q96DW6 304 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 SPATA25Q9BR10 227 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 SLC2A9Q9NRM0 540 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 TAS2R8Q9NYW2 309 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 KLK9Q9UKQ9 250 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 SPATA2Q9UM82 520 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 DYNC2H1Q8NCM8 4307 aaKnown RBP10.9□□□□□ -0.67
SNRNP40-203ENST00000463988 TRAV18A0A075B6X5 111 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 HMX3A6NHT5 357 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 RBFOX2O43251 390 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 OR2J3O76001 311 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 DHFRP00374 187 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 CRYGCP07315 174 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 MXD1Q05195 221 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 HAGHQ16775 308 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 OR5H6Q8NGV6 325 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 OR4A5Q8NH83 315 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 TUBA4BQ9H853 241 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 EDA2RQ9HAV5 297 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 DIABLOQ9NR28 239 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 FBXL7Q9UJT9 491 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
SNRNP40-203ENST00000463988 DPPA5A6NC42 116 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 IZUMO1RA6ND01 250 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 LGALS9O00182 355 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 GGCTO75223 188 aaKnown RBP10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 CLEC2LP0C7M8 214 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 FCGR2CP31995 323 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 CBX5P45973 191 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 RPL8P62917 257 aaKnown RBP10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 ADAMTSL5Q6ZMM2 481 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 OR13F1Q8NGS4 319 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 ISOC1Q96CN7 298 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 AUNIPQ9H7T9 357 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 PALMDQ9NP74 551 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 BET1LQ9NYM9 111 aa10.88□□□□□ -0.67
SNRNP40-203ENST00000463988 LOC100506127A0A0U1RQW1 187 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 A0A1B0GW64 132 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 E7EUB6 86 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 PPYP01298 95 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 FGF2P09038 288 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 HIST1H1BP16401 226 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 HLA-GP17693 338 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 PSMB6P28072 239 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 DEFB114Q30KQ6 69 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 SPAG16Q8N0X2 631 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 GVQW1Q8N7I0 195 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 SECTM1Q8WVN6 248 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 GIMAP1Q8WWP7 306 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 RNF167Q9H6Y7 350 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-203ENST00000463988 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 ZNF785A8K8V0 405 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 PPP5D1E7EU14 171 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 IFNA6P05013 189 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 AREGP15514 252 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 CTRB1P17538 263 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 TAS2R31P59538 309 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 CATR1Q13166 79 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 POU2AF1Q16633 256 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 KCTD21Q4G0X4 260 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 LINC00322Q6ZN03 302 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 CROCCP3Q8IVE0 287 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 DYNLRB2Q8TF09 96 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 GPHA2Q96T91 129 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 SLC5A7Q9GZV3 580 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 ZC4H2Q9NQZ6 224 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 SLC2A8Q9NY64 477 aa10.86□□□□□ -0.67
SNRNP40-203ENST00000463988 RYR2Q92736 4967 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 CSMD3Q7Z407 3707 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 TPPPO94811 219 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 NDUFB8O95169 186 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 OR2C1O95371 312 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 HPRT1P00492 218 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 PTHLHP12272 177 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 FOLR2P14207 255 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 CD81P60033 236 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 TIMM50Q3ZCQ8 353 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 OR4A47Q6IF82 309 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 SSX9Q7RTT3 188 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 OR5AP2Q8NGF4 316 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 CD300LFQ8TDQ1 290 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 BORCS5Q969J3 196 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 EEF1AKMT3Q96AZ1 226 aa10.85□□□□□ -0.67
SNRNP40-203ENST00000463988 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms