RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 TRIP6Q15654 476 aaKnown RBP2.92□□□□□ -1.94
COL8A1-204ENST00000462604 LTC4SQ16873 150 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 RTL8BQ17RB0 113 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 HLA-DRB5Q30154 266 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ZNF718Q3SXZ3 478 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TIGITQ495A1 244 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 COL5A1-AS1Q5SY13 56 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TEPPQ6URK8 271 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TREML4Q6UXN2 200 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 WDR82Q6UXN9 313 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ZNF826PQ6ZT77 177 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 Q6ZT83 130 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 Q6ZWC4 215 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TCF23Q7RTU1 214 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 VASH2Q86V25 355 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 FAM90A1Q86YD7 464 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 C1orf174Q8IYL3 243 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 Q8N7P7 452 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 STPG3Q8N7X2 389 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 RNF152Q8N8N0 203 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TMEM178AQ8NBL3 297 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ZNF114Q8NC26 417 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-204ENST00000462604 MDS2Q8NDY4 140 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 SLC24A4Q8NFF2 622 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 OR4B1Q8NGF8 309 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 RFESDQ8TAC1 157 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 KLF14Q8TD94 323 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-204ENST00000462604 LRRC29Q8WV35 223 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 SSMEM1Q8WWF3 244 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ADTRPQ96IZ2 230 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 SLC35E1Q96K37 410 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 KCNS1Q96KK3 526 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 MIEN1Q9BRT3 115 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ATG101Q9BSB4 218 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 GNB1LQ9BYB4 327 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 FAM234AQ9H0X4 552 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 DEFB127Q9H1M4 99 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 NPVFQ9HCQ7 196 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TMEM140Q9NV12 185 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 AURKAIP1Q9NWT8 199 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-204ENST00000462604 TECRQ9NZ01 308 aaKnown RBP2.92□□□□□ -1.94
COL8A1-204ENST00000462604 FOXJ2Q9P0K8 574 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 SPRR3Q9UBC9 169 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 FOXA2Q9Y261 457 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-204ENST00000462604 R4GN57 208 aa2.92□□□□□ -1.94
COL8A1-204ENST00000462604 ADAMTS20P59510 1910 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 MYO10Q9HD67 2058 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 EML5Q05BV3 1969 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TRBV20OR9-2A0A075B6H5 130 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 A0A1B0GUS0 222 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 A0A1B0GWJ7 208 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 LNP1A1A4G5 178 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PGPEP1LA6NFU8 196 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 DIRC3C9JPN6 131 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PRSS46E5RG02 174 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 C15orf65H3BRN8 121 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 K7EN84 100 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 F2RL2O00254 374 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 SLC17A3O00476 420 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 ITGB1BP1O14713 200 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 RRHO14718 337 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 GFRA3O60609 400 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 YPEL1O60688 119 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 HLA-DQA1P01909 254 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 APCSP02743 223 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TFF1P04155 84 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 AMY1AP04745 511 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 LINC00614P0C842 121 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 ZNF883P0CG24 379 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 IGHV1-2P23083 117 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TNFSF10P50591 281 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 CASP6P55212 293 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 ATP5IP56385 69 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 HSPE1P61604 102 aaKnown RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 RPL31P62899 125 aaKnown RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PSG5Q15238 335 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 EFNB3Q15768 340 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 BATFQ16520 125 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PRSS8Q16651 343 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 ALKBH6Q3KRA9 238 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TMEM30BQ3MIR4 351 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 MORN2Q502X0 79 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 RPL39P5Q59GN2 51 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 CENPWQ5EE01 88 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 OR10J3Q5JRS4 329 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TPTE2P1Q5T6R2 138 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 DMRTA1Q5VZB9 504 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 MBNL2Q5VZF2 373 aaKnown RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 FAM53AQ6NSI3 398 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PQLC2Q6ZP29 291 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 FAM214BQ7L5A3 538 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 LRP11Q86VZ4 500 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 CXorf67Q86X51 503 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 C11orf53Q8IXP5 236 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 MMD2Q8IY49 270 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 OR8I2Q8N0Y5 310 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TPRX1Q8N7U7 411 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 CNEP1R1Q8N9A8 125 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 OR4P4Q8NGL7 312 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms