RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FCGR3BO75015 233 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 PMP2P02689 132 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 GP9P14770 177 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 GNRHRP30968 328 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 RCVRNP35243 200 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 CHRNA7P36544 502 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 SLURP1P55000 103 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 FXYD4P59646 89 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 UBE2KP61086 200 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 PRSS8Q16651 343 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 RNASE12Q5GAN4 147 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 DHRS11Q6UWP2 260 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF66Q6ZN08 573 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF818PQ6ZRF7 136 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF429Q86V71 674 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 TMEM17Q86X19 198 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 PUSL1Q8N0Z8 303 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 MFSD4AQ8N468 514 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 TCTEX1D1Q8N7M0 179 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR1N2Q8NGR9 330 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR5H2Q8NGV7 314 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR52I2Q8NH67 350 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 GRPEL2Q8TAA5 225 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 OSR1Q8TAX0 266 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 CASTOR1Q8WTX7 329 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 TCTEX1D2Q8WW35 142 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 ARPC1AQ92747 370 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 DLX4Q92988 240 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 CITED4Q96RK1 184 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 ABHD1Q96SE0 405 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 HSD17B10Q99714 261 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 TM2D3Q9BRN9 247 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF2Q9BSG1 426 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 SLIRPQ9GZT3 109 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 SLC5A7Q9GZV3 580 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 EDA2RQ9HAV5 297 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 TAS2R8Q9NYW2 309 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 EXTL2Q9UBQ6 330 aa6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 FOXA2Q9Y261 457 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-210ENST00000462553 IGHV4OR15-8A0A075B7B6 117 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 A0A087WW49 117 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 OVOL1O14753 267 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 SAP30O75446 220 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 LYL1P12980 280 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 HLA-DMAP28067 261 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 RAB9AP51151 201 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 TAS2R46P59540 309 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 HERV-K104P61576 105 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 CBX3Q13185 183 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 FXYD3Q14802 87 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 VMA21Q3ZAQ7 101 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 AKIRIN2Q53H80 203 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 C10orf55Q5SWW7 151 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZFAND6Q6FIF0 208 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 ACSM6Q6P461 480 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 VKORC1L1Q8N0U8 176 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 TEX45Q8NA69 505 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZBTB34Q8NCN2 500 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 LFNGQ8NES3 379 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR4S2Q8NH73 311 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 ABHD5Q8WTS1 349 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 NXF2Q9GZY0 626 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZNF430Q9H8G1 570 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 KLK11Q9UBX7 282 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 PRELID3BQ9Y3B1 194 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 HECTD4Q9Y4D8 3996 aa6.08□□□□□ -1.44
CDC42BPA-210ENST00000462553 SMIM31A0A1B0GVY4 71 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 A0A1B0GW64 132 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 TEX22C9J3V5 150 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 M0QYG6 137 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 RBFOX2O43251 390 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 RBMXL2O75526 392 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 TPPPO94811 219 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 KBTBD11O94819 623 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 LGALS1P09382 135 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 KIR2DS2P43631 304 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 DEFA5Q01523 94 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 POU2AF1Q16633 256 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 ACTBL2Q562R1 376 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 AADACL3Q5VUY0 350 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 UNQ5815/PRO19632Q6UWF5 114 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 HAPLN4Q86UW8 402 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 LHFPL1Q86WI0 220 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 SRSF12Q8WXF0 261 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 SOSTQ9BQB4 213 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 MTFP1Q9UDX5 166 aa6.07□□□□□ -1.44
CDC42BPA-210ENST00000462553 HERC2O95714 4834 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 CGB1A6NKQ9 187 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 E7EUB6 86 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 LINC01619G3V211 115 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 GABARAPH6UMI1 98 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR2A4O95047 310 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 S1PR2O95136 353 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 CD74P04233 296 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 CD3DP04234 171 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 RLN1P04808 185 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 IL6RP08887 468 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 APELAP0DMC3 54 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 MYOD1P15172 320 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms