RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ERVK-16P61578 105 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 NHLH2Q02577 135 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 POU2AF1Q16633 256 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 SPINK9Q5DT21 86 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 OR4A47Q6IF82 309 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 RITA1Q96K30 269 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
RPRD1B-203ENST00000462548 H3BP45 60 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 GPR137BO60478 399 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 APOA2P02652 100 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 PAX6P26367 422 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 VAMP2P63027 116 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 CLEC12BQ2HXU8 276 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 DHRS7BQ6IAN0 325 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 LHFPL4Q7Z7J7 247 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 PCGF1Q9BSM1 259 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 ZNF471Q9BX82 626 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 SMIM3Q9BZL3 60 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 LYRM2Q9NU23 88 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 FBXL17Q9UF56 701 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 FAM90A26D6RGX4 464 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 PVALBP20472 110 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 CAV2P51636 162 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 UBE2KP61086 200 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 AARDQ4LEZ3 155 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 TMEM177Q53S58 311 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 WFDC1Q9HC57 220 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
RPRD1B-203ENST00000462548 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 FAM90A9PA6NNJ1 464 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 MYOD1P15172 320 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 TMEM252Q8N6L7 170 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 LHX4Q969G2 390 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 REG4Q9BYZ8 158 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 RBMXL2O75526 392 aaKnown RBP12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 HRASP01112 189 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 IFNA7P01567 189 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 TPTE2P1Q5T6R2 138 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 GPR157Q5UAW9 335 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 APCP25054 2843 aa12.11□□□□□ -0.47
RPRD1B-203ENST00000462548 TOX4O94842 621 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 GAPDHP04406 335 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 SAA1P0DJI8 122 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 HTR1DP28221 377 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 DSCR9P59020 149 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 CLRN3Q8NCR9 226 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 OSR1Q8TAX0 266 aaPredicted RBP12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 RPEQ96AT9 228 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 INSIG2Q9Y5U4 225 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 ARHGDIBP52566 201 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 RAB14P61106 215 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 RPL7L1Q6DKI1 246 aaKnown RBP12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 DPM3Q9P2X0 92 aa12.1□□□□□ -0.47
RPRD1B-203ENST00000462548 TNCP24821 2201 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 A0A096LNT2 108 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 TXNL1O43396 289 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 CST7O76096 145 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 MEOX2P50222 304 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 TMEM267Q0VDI3 215 aaPredicted RBP12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 DEFB113Q30KQ7 82 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 PUSL1Q8N0Z8 303 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 DYNAPQ8N1N2 210 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 PSENENQ9NZ42 101 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 HILPDAQ9Y5L2 63 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 WSB1Q9Y6I7 421 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 MFSD2BA6NFX1 497 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 UPK2O00526 184 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 OR4C13Q8NGP0 309 aa12.09□□□□□ -0.47
RPRD1B-203ENST00000462548 GCN1Q92616 2671 aaKnown RBP12.08□□□□□ -0.47
RPRD1B-203ENST00000462548 MC5RP33032 325 aa12.08□□□□□ -0.48
RPRD1B-203ENST00000462548 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-203ENST00000462548 PAX8Q06710 450 aa12.08□□□□□ -0.48
RPRD1B-203ENST00000462548 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
RPRD1B-203ENST00000462548 DTD1Q8TEA8 209 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms