RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FAM90A26D6RGX4 464 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 H3BUX3 64 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 CLDN34H7C241 214 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 UPK2O00526 184 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 ACTL6BO94805 426 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 IGLV2-23P01705 113 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 BCAP31P51572 246 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 SMCO1Q147U7 214 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 OR4A47Q6IF82 309 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 ZNF429Q86V71 674 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 MMD2Q8IY49 270 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 OR52E5Q8NH55 327 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 OR4A16Q8NH70 328 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
RTF1-202ENST00000462276 GPR146Q96CH1 333 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 JMJD8Q96S16 334 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 PLSCR3Q9NRY6 295 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 MGAT4CQ9UBM8 478 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 ZNF257Q9Y2Q1 563 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 SIGLEC9Q9Y336 463 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 C13orf42A0A1B0GVH6 325 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 NCBP2LA6PVI3 153 aaKnown RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 GOSR2O14653 212 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 SLC25A17O43808 307 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 PITX3O75364 302 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 ADAP1O75689 374 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 KBTBD11O94819 623 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 CRYGBP07316 175 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 GIPP09681 153 aaPredicted RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 FAM157CP0CG43 387 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 SAA1P0DJI8 122 aaPredicted RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 RAP2BP61225 183 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 RPL8P62917 257 aaKnown RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 FGL1Q08830 312 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 HNF4GQ14541 408 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 FCN2Q15485 313 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 PRSS8Q16651 343 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 C5orf64Q2M2E5 130 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 IAH1Q2TAA2 248 aaPredicted RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 PPP1R27Q86WC6 154 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 OR5B3Q8NH48 314 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 C22orf15Q8WYQ4 148 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 PDCD10Q9BUL8 212 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 NMES1Q9C002 83 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 RANBP3Q9H6Z4 567 aaPredicted RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 PRR13Q9NZ81 148 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
RTF1-202ENST00000462276 CACNG5Q9UF02 275 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 VPREB3Q9UKI3 123 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 MOB4Q9Y3A3 225 aa8.53□□□□□ -1.04
RTF1-202ENST00000462276 FAM25EA8MYX2 175 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 CRLF1O75462 422 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 RBMXL2O75526 392 aaKnown RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 MED6O75586 246 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 CD24P25063 80 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 RPL15P61313 204 aaKnown RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 RELBQ01201 579 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 ID3Q02535 119 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 PLGLAQ15195 96 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 PDLIM3Q53GG5 364 aaPredicted RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 ZNF562Q6V9R5 426 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 SSX9Q7RTT3 188 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 HSD17B13Q7Z5P4 300 aaPredicted RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 VKORC1L1Q8N0U8 176 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 FAM71E2Q8N5Q1 922 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 OR11H7Q8NGC8 314 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 OR1S1Q8NH92 325 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 RITA1Q96K30 269 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 FYTTD1Q96QD9 318 aaKnown RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 RASL11BQ9BPW5 248 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 SRSF8Q9BRL6 282 aaKnown RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 SLC25A33Q9BSK2 321 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 ZNF436Q9C0F3 470 aaPredicted RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 COMMD5Q9GZQ3 224 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 TMEM14BQ9NUH8 114 aa8.52□□□□□ -1.05
RTF1-202ENST00000462276 FOXA2Q9Y261 457 aaPredicted RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 ZNF469Q96JG9 3925 aaPredicted RBP8.52□□□□□ -1.05
RTF1-202ENST00000462276 MXRA5Q9NR99 2828 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 A0A1B0GVG6 124 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 ST8SIA3O43173 380 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 IGHV4-59P01825 116 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 HLA-DRB1P01911 266 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 RLN2P04090 185 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 PET100P0DJ07 73 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 CXCL3P19876 107 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 PAX6P26367 422 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 F2RL1P55085 397 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 ATP5IP56385 69 aaPredicted RBP8.51□□□□□ -1.05
RTF1-202ENST00000462276 H2BFSP57053 126 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 SPCS3P61009 180 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 HSPE1P61604 102 aaKnown RBP8.51□□□□□ -1.05
RTF1-202ENST00000462276 IL15RAQ13261 267 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 Q6ZRM9 215 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 IL17RELQ6ZVW7 336 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 SIGLECL1Q8N7X8 197 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 Q8N9W7 124 aa8.51□□□□□ -1.05
RTF1-202ENST00000462276 ZBTB8BQ8NAP8 495 aaPredicted RBP8.51□□□□□ -1.05
RTF1-202ENST00000462276 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms