RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PROP1O75360 226 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 OR2A4O95047 310 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 HLA-DQB1P01920 261 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 EIF4EP06730 217 aaKnown RBP6.84□□□□□ -1.31
LDB1-203ENST00000461873 ELK1P19419 428 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 FCGR2CP31995 323 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 PJVKQ0ZLH3 352 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 C19orf54Q5BKX5 351 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 LCN12Q6JVE5 192 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 MZT2AQ6P582 158 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 SAMD12Q8N8I0 201 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 ZBTB34Q8NCN2 500 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 OR9G4Q8NGQ1 327 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 DYNLRB2Q8TF09 96 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 OR2A7Q96R45 310 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 HRASLSQ9HDD0 168 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 PALMDQ9NP74 551 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 TAS2R8Q9NYW2 309 aa6.84□□□□□ -1.31
LDB1-203ENST00000461873 RBMX2Q9Y388 322 aaKnown RBP6.84□□□□□ -1.31
LDB1-203ENST00000461873 LINC00473A8K010 186 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 SAA1P0DJI8 122 aaPredicted RBP6.83□□□□□ -1.32
LDB1-203ENST00000461873 S100A5P33763 92 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 MAS1LP35410 378 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 RPL27AP46776 148 aaKnown RBP6.83□□□□□ -1.32
LDB1-203ENST00000461873 SYNJ2BPP57105 145 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 FXYD4P59646 89 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 ERVK-16P61578 105 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 RHOGP84095 191 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 ASPHD1Q5U4P2 390 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 SNX29P2Q8IUI4 249 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 MFSD4AQ8N468 514 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 DMBX1Q8NFW5 382 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 DIRAS2Q96HU8 199 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 SLC5A7Q9GZV3 580 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 ZNF430Q9H8G1 570 aaPredicted RBP6.83□□□□□ -1.32
LDB1-203ENST00000461873 THYN1Q9P016 225 aa6.83□□□□□ -1.32
LDB1-203ENST00000461873 ELF5Q9UKW6 265 aaPredicted RBP6.83□□□□□ -1.32
LDB1-203ENST00000461873 IGKV1D-8A0A087WSZ0 117 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 SRRM4A7MD48 611 aaKnown RBP6.82□□□□□ -1.32
LDB1-203ENST00000461873 TNFSF12O43508 249 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 KBTBD11O94819 623 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 BRI3O95415 125 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 IFNA6P05013 189 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 CRYGBP07316 175 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 PTHLHP12272 177 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 HIST1H1BP16401 226 aaKnown RBP6.82□□□□□ -1.32
LDB1-203ENST00000461873 EXOSC2Q13868 293 aaKnown RBP6.82□□□□□ -1.32
LDB1-203ENST00000461873 RNASE12Q5GAN4 147 aaKnown RBP6.82□□□□□ -1.32
LDB1-203ENST00000461873 TMEM69Q5SWH9 247 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 AADACL3Q5VUY0 350 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 ZNF343Q6P1L6 599 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 SSX9Q7RTT3 188 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 HOGA1Q86XE5 327 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 CMTM1Q8IZ96 169 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 SPAG16Q8N0X2 631 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 Q8N402 240 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 NECAP1Q8NC96 275 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 OR4A5Q8NH83 315 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 CD300LFQ8TDQ1 290 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 DDB2Q92466 427 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 AP3S1Q92572 193 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 SLC25A38Q96DW6 304 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 COMMD5Q9GZQ3 224 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 AKIP1Q9NQ31 210 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 EXTL2Q9UBQ6 330 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 ZNF257Q9Y2Q1 563 aa6.82□□□□□ -1.32
LDB1-203ENST00000461873 FABP12A6NFH5 140 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 C3orf84H3BNL1 204 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 OR2J3O76001 311 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 PPYP01298 95 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 FCER2P06734 321 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 FRMD6-AS1P0C7T7 363 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 TAS2R46P59540 309 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 TSPAN5P62079 268 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 RPL8P62917 257 aaKnown RBP6.81□□□□□ -1.32
LDB1-203ENST00000461873 KLF5Q13887 457 aaPredicted RBP6.81□□□□□ -1.32
LDB1-203ENST00000461873 MSMO1Q15800 293 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 C15orf32Q32M92 178 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 FAM106AQ4KMX7 169 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 UBE2NLQ5JXB2 153 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 CCDC190Q86UF4 302 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 TMEM17Q86X19 198 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 VKORC1L1Q8N0U8 176 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 TTC9CQ8N5M4 171 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 ADAD2Q8NCV1 583 aaKnown RBP6.81□□□□□ -1.32
LDB1-203ENST00000461873 OR5AP2Q8NGF4 316 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 OR5H2Q8NGV7 314 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 EEF1AKMT3Q96AZ1 226 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 RCHY1Q96PM5 261 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 CCL28Q9NRJ3 127 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 SLC2A8Q9NY64 477 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 EHFQ9NZC4 300 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 FBXL7Q9UJT9 491 aa6.81□□□□□ -1.32
LDB1-203ENST00000461873 IGKV1D-13A0A0B4J2D9 117 aa6.8□□□□□ -1.32
LDB1-203ENST00000461873 LINC00854A0A1B0GVQ3 168 aa6.8□□□□□ -1.32
LDB1-203ENST00000461873 ZNF320A2RRD8 509 aa6.8□□□□□ -1.32
LDB1-203ENST00000461873 SULT1C2O00338 296 aa6.8□□□□□ -1.32
LDB1-203ENST00000461873 XRCC3O43542 346 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms