RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 APELAP0DMC3 54 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 GABARAPL2P60520 117 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 DEFA5Q01523 94 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 EXOSC2Q13868 293 aaKnown RBP6.61□□□□□ -1.35
HDAC9-220ENST00000461409 MRGPRG-AS1Q2M3A8 158 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 CDNFQ49AH0 187 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 HACD4Q5VWC8 232 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 C22orf42Q6IC83 251 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 KCTD9Q7L273 389 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 LAX1Q8IWV1 398 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 OR4S2Q8NH73 311 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 VSTM2AQ8TAG5 236 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 HSD17B10Q99714 261 aaKnown RBP6.61□□□□□ -1.35
HDAC9-220ENST00000461409 ST6GALNAC5Q9BVH7 336 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 DCSTAMPQ9H295 470 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 OR2W1Q9Y3N9 320 aa6.61□□□□□ -1.35
HDAC9-220ENST00000461409 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
HDAC9-220ENST00000461409 IGKV1D-8A0A087WSZ0 117 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.6□□□□□ -1.35
HDAC9-220ENST00000461409 TRBV9A0A0B4J1U6 114 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 BMPR1BO00238 502 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 HLA-DQB1P01920 261 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 SAA1P0DJI8 122 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-220ENST00000461409 FGF9P31371 208 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-220ENST00000461409 GNG2P59768 71 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 HAGHQ16775 308 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 C15orf32Q32M92 178 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 CNIH2Q6PI25 160 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 TPRA1Q86W33 373 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 DYNLRB2Q8TF09 96 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 FCGR1BQ92637 280 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 THAP7Q9BT49 309 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-220ENST00000461409 AKIP1Q9NQ31 210 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 RAB26Q9ULW5 256 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 ZNF257Q9Y2Q1 563 aa6.6□□□□□ -1.35
HDAC9-220ENST00000461409 RBMX2Q9Y388 322 aaKnown RBP6.6□□□□□ -1.35
HDAC9-220ENST00000461409 LCE6AA0A183 80 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 DPPA5A6NC42 116 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 TMEM235A6NFC5 223 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 RBMXL2O75526 392 aaKnown RBP6.59□□□□□ -1.35
HDAC9-220ENST00000461409 TPPPO94811 219 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 KBTBD11O94819 623 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 DHFRP00374 187 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 NFYAP23511 347 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-220ENST00000461409 PSMB9P28065 219 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 MAS1LP35410 378 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 OR2B11Q5JQS5 317 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 UBE2UQ5VVX9 321 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 NR2C2APQ86WQ0 139 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 NUDCD2Q8WVJ2 157 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 TCTEX1D2Q8WW35 142 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 OR2A7Q96R45 310 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 AIFM2Q9BRQ8 373 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 OR51E2Q9H255 320 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 EDA2RQ9HAV5 297 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 SLC2A8Q9NY64 477 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 DAPK2Q9UIK4 370 aa6.59□□□□□ -1.35
HDAC9-220ENST00000461409 CSMD3Q7Z407 3707 aa6.59□□□□□ -1.36
HDAC9-220ENST00000461409 SMIM30A4D0T7 59 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 NPIPB5A8MRT5 1133 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 J3QRK9 145 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 GGCTO75223 188 aaKnown RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 OR2J3O76001 311 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 HRASP01112 189 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 PRH1P02810 166 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 KIR2DS2P43631 304 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 RPL27AP46776 148 aaKnown RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 MECP2P51608 486 aaKnown RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 SCAND1P57086 179 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 CD81P60033 236 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 ZNF45Q02386 682 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 MSMO1Q15800 293 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 CD300EQ496F6 205 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 C10orf55Q5SWW7 151 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 ZFAND6Q6FIF0 208 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 SFXN4Q6P4A7 337 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 ZNF66Q6ZN08 573 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 IL17DQ8TAD2 202 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 TMEM167AQ8TBQ9 72 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 Q9H521 79 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 SLC2A9Q9NRM0 540 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 TXNL4BQ9NX01 149 aaKnown RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 RHBDL2Q9NX52 303 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 TECRQ9NZ01 308 aaKnown RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 ANXA10Q9UJ72 324 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 ELF5Q9UKW6 265 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-220ENST00000461409 SPATA2Q9UM82 520 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 SSR3Q9UNL2 185 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 CEPT1Q9Y6K0 416 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 TNCP24821 2201 aa6.58□□□□□ -1.36
HDAC9-220ENST00000461409 LYSTQ99698 3801 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 A0A0A6YYH2 397 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 IGKV1D-13A0A0B4J2D9 117 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 IZUMO1RA6ND01 250 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 HMX3A6NHT5 357 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 A6NJ64 397 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 C2orf70A6NJV1 201 aa6.57□□□□□ -1.36
HDAC9-220ENST00000461409 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms