RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TRAV3A0A0B4J244 114 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 C3orf85A0A1B0GTC6 90 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 H0Y980 276 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 IL6RP08887 468 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-229ENST00000460826 MYOD1P15172 320 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 CD40LGP29965 261 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 BTCP35070 178 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 CCR6P51684 374 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 CRIP2P52943 208 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-229ENST00000460826 TNXAQ16473 311 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 ECSCRQ19T08 205 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 SP6Q3SY56 376 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 C19orf54Q5BKX5 351 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 GRPEL2Q8TAA5 225 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-229ENST00000460826 CCDC32Q9BV29 185 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 FAM212BQ9NTI7 297 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-229ENST00000460826 TMEM140Q9NV12 185 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 NUBP2Q9Y5Y2 271 aa10.98□□□□□ -0.65
HDLBP-229ENST00000460826 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 NAP1L6A6NFF2 107 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 CRYM-AS1A6NIL9 109 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 MARCH11A6NNE9 402 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 CNIH1O95406 144 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 VDAC1P21796 283 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 PPIFP30405 207 aaKnown RBP10.97□□□□□ -0.65
HDLBP-229ENST00000460826 G6PCP35575 357 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 CD83Q01151 205 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 ZNF846Q147U1 533 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 LCNL1Q6ZST4 164 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 MMD2Q8IY49 270 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 LFNGQ8NES3 379 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 DMBX1Q8NFW5 382 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 VSTM2AQ8TAG5 236 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 WDR12Q9GZL7 423 aaKnown RBP10.97□□□□□ -0.65
HDLBP-229ENST00000460826 NAA60Q9H7X0 242 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 BET1LQ9NYM9 111 aa10.97□□□□□ -0.65
HDLBP-229ENST00000460826 A0A1B0GW64 132 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 ADARB2-AS1A8MUL3 147 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 UPK2O00526 184 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 SOX15O60248 233 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 KRASP01116 189 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 OR5AC1P0C628 307 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 OR9G9P0C7N8 305 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 UCP1P25874 307 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 SLC35B1P78383 322 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 ASPHD1Q5U4P2 390 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 UNQ5815/PRO19632Q6UWF5 114 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 MINDY2Q8NBR6 621 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.65
HDLBP-229ENST00000460826 SEC22AQ96IW7 307 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.65
HDLBP-229ENST00000460826 C7orf50Q9BRJ6 194 aaKnown RBP10.96□□□□□ -0.65
HDLBP-229ENST00000460826 TEX13DA0A0J9YY54 714 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-229ENST00000460826 E7EUB6 86 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 LYRM1O43325 122 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 IGKV1-5P01602 117 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 IGHG4P01861 327 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 SERPINE2P07093 398 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 APELAP0DMC3 54 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 AKR1C4P17516 323 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 ERVK-16P61578 105 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
HDLBP-229ENST00000460826 SUPT4H1P63272 117 aaKnown RBP10.95□□□□□ -0.66
HDLBP-229ENST00000460826 IFITM3Q01628 133 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 TMED4Q7Z7H5 227 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 OR4X2Q8NGF9 303 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 OR4A5Q8NH83 315 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 LHFPL5Q8TAF8 219 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 GLYATL2Q8WU03 294 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 SLC25A21Q9BQT8 299 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-229ENST00000460826 AIFM2Q9BRQ8 373 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 TMEM222Q9H0R3 208 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 PRR13Q9NZ81 148 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 TBC1D24Q9ULP9 559 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 NSG2Q9Y328 171 aa10.95□□□□□ -0.66
HDLBP-229ENST00000460826 MGAM2Q2M2H8 2515 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 A0A1W2PN81 502 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 TCRBV4S1A1TA0A5B7 111 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 MSGN1A6NI15 193 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 CGB1A6NKQ9 187 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 CENPXA8MT69 81 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 CREBL2O60519 120 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-229ENST00000460826 NDUFB6O95139 128 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 IGLV1-40P01703 118 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 OPN1MWP04001 364 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 RPLP1P05386 114 aaKnown RBP10.94□□□□□ -0.66
HDLBP-229ENST00000460826 OPN1MW2P0DN77 364 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 OPN1MW3P0DN78 364 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 HLA-GP17693 338 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 CHRNA7P36544 502 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 RBMS2Q15434 407 aaKnown RBP10.94□□□□□ -0.66
HDLBP-229ENST00000460826 IZUMO4Q1ZYL8 232 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 TRIM16LQ309B1 348 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
HDLBP-229ENST00000460826 AKIRIN2Q53H80 203 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms