RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 PAX9P55771 341 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 TAS2R30P59541 319 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 HABP2Q14520 560 aaPredicted RBP12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 SSX2Q16385 188 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 OR4A5Q8NH83 315 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 VSTM2AQ8TAG5 236 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 CFHR4Q92496 578 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 RNF5Q99942 180 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 PRNDQ9UKY0 176 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 FOXA2Q9Y261 457 aaPredicted RBP12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 WSB1Q9Y6I7 421 aa12.76□□□□□ -0.37
PCYT1A-212ENST00000460677 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 NPFFO15130 113 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 KBTBD11O94819 623 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 CAV2P51636 162 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 SPCS3P61009 180 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 VMA21Q3ZAQ7 101 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 ARPC5LQ9BPX5 153 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 SLC25A31Q9H0C2 315 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 C7orf69Q9H7B7 122 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 POLQO75417 2590 aa12.75□□□□□ -0.37
PCYT1A-212ENST00000460677 ABCA12Q86UK0 2595 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 VENTXO95231 258 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 IFNA17P01571 189 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 IAPPP10997 89 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 SAA4P35542 130 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 DYNAPQ8N1N2 210 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 TMEM252Q8N6L7 170 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 TMEM167AQ8TBQ9 72 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 C17orf50Q8WW18 174 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 RITA1Q96K30 269 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 CIB3Q96Q77 187 aaPredicted RBP12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 WNK2Q9Y3S1 2297 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
PCYT1A-212ENST00000460677 CENPEQ02224 2701 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 IGSF23A1L1A6 192 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 TAAR5O14804 337 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 LY86O95711 162 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 HSPE1P61604 102 aaKnown RBP12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 EWSR1Q01844 656 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 SLC51BQ86UW2 128 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 TEX45Q8NA69 505 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 MAPK1IP1LQ8NDC0 245 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 FKBP11Q9NYL4 201 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 ZNF257Q9Y2Q1 563 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
PCYT1A-212ENST00000460677 J3QLI3 93 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 RGS13O14921 159 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 SLC25A17O43808 307 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 FGF2P09038 288 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 IGHV4-31P0DP07 118 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 PSG5Q15238 335 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 TMEM249Q2WGJ8 235 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 GCN1Q92616 2671 aaKnown RBP12.72□□□□□ -0.37
PCYT1A-212ENST00000460677 APCP25054 2843 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 H3BP45 60 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 MOSP00540 346 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 TGFAP01135 160 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 IGKV1D-33P01593 117 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 IGKV1-33P01594 117 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 CRYGBP07316 175 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 PAX6P26367 422 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 RPL8P62917 257 aaKnown RBP12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 NHLH2Q02577 135 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 BAXQ07812 192 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 SPINK9Q5DT21 86 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 TEX261Q6UWH6 196 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 OR8H1Q8NGG4 311 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 OR5B3Q8NH48 314 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 BSCL2Q96G97 398 aaPredicted RBP12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 CLCC1Q96S66 551 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 FOXC2Q99958 501 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 ZNF471Q9BX82 626 aaPredicted RBP12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 FBXL17Q9UF56 701 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 U3KQ87 197 aa12.71□□□□□ -0.37
PCYT1A-212ENST00000460677 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
PCYT1A-212ENST00000460677 SPDEFO95238 335 aa12.7□□□□□ -0.38
PCYT1A-212ENST00000460677 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
PCYT1A-212ENST00000460677 CNTFRP26992 372 aa12.7□□□□□ -0.38
PCYT1A-212ENST00000460677 UBA52P62987 128 aaKnown RBP12.7□□□□□ -0.38
PCYT1A-212ENST00000460677 EBI3Q14213 229 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms