RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PSENENQ9NZ42 101 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 FBXL17Q9UF56 701 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 TET2Q6N021 2002 aaPredicted RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 A0A096LNT2 108 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 OOSP1A8MZH6 123 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 UPK2O00526 184 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 EXOSC2Q13868 293 aaKnown RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 LHFPL4Q7Z7J7 247 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 PDZD9Q8IXQ8 264 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 VSTM2AQ8TAG5 236 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 PRNDQ9UKY0 176 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 TBL2Q9Y4P3 447 aaKnown RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 HELZ2Q9BYK8 2649 aaKnown RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 IGHV3-72A0A0B4J1Y9 119 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 SPDEFO95238 335 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 LY86O95711 162 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 IFNA17P01571 189 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 MSMBP08118 114 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 LGALS7P47929 136 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 HIST2H2BCQ6DN03 193 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 OR4A5Q8NH83 315 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 DTD1Q8TEA8 209 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 MED13LQ71F56 2210 aa19.7■□□□□ 0.74
U2AF1-204ENST00000459639 CEBPZOSA8MTT3 80 aa19.69■□□□□ 0.74
U2AF1-204ENST00000459639 B4DSR2 109 aa19.69■□□□□ 0.74
U2AF1-204ENST00000459639 KBTBD11O94819 623 aa19.69■□□□□ 0.74
U2AF1-204ENST00000459639 IGLV2-23P01705 113 aa19.69■□□□□ 0.74
U2AF1-204ENST00000459639 LGALS4P56470 323 aa19.69■□□□□ 0.74
U2AF1-204ENST00000459639 NUP50Q9UKX7 468 aa19.69■□□□□ 0.74
U2AF1-204ENST00000459639 A0A1W2PRD5 423 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 A0A1W2PRF3 423 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 A0A1W2PRM7 423 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 NHLH2Q02577 135 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 HABP2Q14520 560 aaPredicted RBP19.68■□□□□ 0.74
U2AF1-204ENST00000459639 VMA21Q3ZAQ7 101 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 CCDC144NLQ6NUI1 221 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 UBQLN2Q9UHD9 624 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 H3BP45 60 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 TPT1P13693 172 aaKnown RBP19.68■□□□□ 0.74
U2AF1-204ENST00000459639 CD1BP29016 333 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 STX12Q86Y82 276 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 ZDHHC16Q969W1 377 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 BSCL2Q96G97 398 aaPredicted RBP19.68■□□□□ 0.74
U2AF1-204ENST00000459639 FKBP11Q9NYL4 201 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 TCF19Q9Y242 345 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 ZNF257Q9Y2Q1 563 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 HILPDAQ9Y5L2 63 aa19.68■□□□□ 0.74
U2AF1-204ENST00000459639 TIMM23O14925 209 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 SULT1A1P50225 295 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 HSPE1P61604 102 aaKnown RBP19.67■□□□□ 0.74
U2AF1-204ENST00000459639 EIF5AP63241 154 aaKnown RBP19.67■□□□□ 0.74
U2AF1-204ENST00000459639 Q5PR19 223 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 CLEC9AQ6UXN8 241 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 TMEM167AQ8TBQ9 72 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 CFHR4Q92496 578 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 PHYHIPLQ96FC7 376 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 RNF5Q99942 180 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 SMIM3Q9BZL3 60 aa19.67■□□□□ 0.74
U2AF1-204ENST00000459639 FGF2P09038 288 aa19.66■□□□□ 0.74
U2AF1-204ENST00000459639 LOXL1Q08397 574 aaPredicted RBP19.66■□□□□ 0.74
U2AF1-204ENST00000459639 PRSS57Q6UWY2 283 aa19.66■□□□□ 0.74
U2AF1-204ENST00000459639 CLCC1Q96S66 551 aa19.66■□□□□ 0.74
U2AF1-204ENST00000459639 OR51B2Q9Y5P1 312 aa19.66■□□□□ 0.74
U2AF1-204ENST00000459639 CELSR2Q9HCU4 2923 aa19.66■□□□□ 0.74
U2AF1-204ENST00000459639 TRAV20A0A0B4J274 112 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 JTBO76095 146 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 SPINK9Q5DT21 86 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 SPANXN5Q5MJ07 72 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 TSNAXQ99598 290 aaKnown RBP19.65■□□□□ 0.74
U2AF1-204ENST00000459639 CST7O76096 145 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 VENTXO95231 258 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 RPL7L1Q6DKI1 246 aaKnown RBP19.65■□□□□ 0.74
U2AF1-204ENST00000459639 TMEM14EPQ6UXP3 125 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 BAP18Q8IXM2 172 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 SCARB1Q8WTV0 552 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 RITA1Q96K30 269 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 ITGB1BP2Q9UKP3 347 aa19.65■□□□□ 0.74
U2AF1-204ENST00000459639 GATA3P23771 443 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 RPL8P62917 257 aaKnown RBP19.64■□□□□ 0.73
U2AF1-204ENST00000459639 TMEM267Q0VDI3 215 aaPredicted RBP19.64■□□□□ 0.73
U2AF1-204ENST00000459639 SSX2Q16385 188 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 ALKAL2Q6UX46 152 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 STPG2Q8N412 459 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 TEX45Q8NA69 505 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 OR5B3Q8NH48 314 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 MALSU1Q96EH3 234 aa19.64■□□□□ 0.73
U2AF1-204ENST00000459639 STRAPQ9Y3F4 350 aaKnown RBP19.64■□□□□ 0.73
U2AF1-204ENST00000459639 BORCS7-ASMTA0A0B4J1R7 106 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 SLC25A17O43808 307 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 VDAC2P45880 294 aaPredicted RBP19.63■□□□□ 0.73
U2AF1-204ENST00000459639 LINC01356Q8N9X3 169 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 UBAC2Q8NBM4 344 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 OR5C1Q8NGR4 320 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 HIPK2Q9H2X6 1198 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 WFDC1Q9HC57 220 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 AUP1Q9Y679 476 aa19.63■□□□□ 0.73
U2AF1-204ENST00000459639 CENPEQ02224 2701 aa19.62■□□□□ 0.73
U2AF1-204ENST00000459639 CENPVL3A0A0U1RRI6 287 aa19.62■□□□□ 0.73
U2AF1-204ENST00000459639 NPFFO15130 113 aa19.62■□□□□ 0.73
U2AF1-204ENST00000459639 METTL15P1P0C7V9 234 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms