RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 RSRP1Q9BUV0 290 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 FXYD6Q9H0Q3 95 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 ZNF430Q9H8G1 570 aaPredicted RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 HRASLSQ9HDD0 168 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 BET1LQ9NYM9 111 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 COMMD9Q9P000 198 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 DISC1C4P0D8 188 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 SOX15O60248 233 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 RAMP3O60896 148 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 CD74P04233 296 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 RLN1P04808 185 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 PGAM2P15259 253 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 TPPP2P59282 170 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 RPL8P62917 257 aaKnown RBP12.58□□□□□ -0.4
CD28-203ENST00000458610 DGCR2P98153 550 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 KIAA0141Q14154 515 aaPredicted RBP12.58□□□□□ -0.4
CD28-203ENST00000458610 POU2AF1Q16633 256 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 SAMD5Q5TGI4 173 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 SLC25A42Q86VD7 318 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 OR5T1Q8NG75 326 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 OR1N2Q8NGR9 330 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 TERB2Q8NHR7 220 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 ZFAND1Q8TCF1 268 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 DPF1Q92782 380 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
CD28-203ENST00000458610 TINAGL1Q9GZM7 467 aaPredicted RBP12.58□□□□□ -0.4
CD28-203ENST00000458610 GSTZ1O43708 216 aaPredicted RBP12.57□□□□□ -0.4
CD28-203ENST00000458610 TRGV3P03979 118 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 ECI1P42126 302 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 LPAR6P43657 344 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 SSBP2P81877 361 aaPredicted RBP12.57□□□□□ -0.4
CD28-203ENST00000458610 DEFA6Q01524 100 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 MRGPRG-AS1Q2M3A8 158 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 ETV3LQ6ZN32 361 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 SSX9Q7RTT3 188 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 DMBX1Q8NFW5 382 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
CD28-203ENST00000458610 RBM38Q9H0Z9 239 aaKnown RBP12.57□□□□□ -0.4
CD28-203ENST00000458610 ZMAT5Q9UDW3 170 aaKnown RBP12.57□□□□□ -0.4
CD28-203ENST00000458610 C13orf42A0A1B0GVH6 325 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 DPPA5A6NC42 116 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 FGF2P09038 288 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 OR9G9P0C7N8 305 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 AKAIN1P0CW23 69 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 RPL27AP46776 148 aaKnown RBP12.56□□□□□ -0.4
CD28-203ENST00000458610 RAB25P57735 213 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 PHLDA2Q53GA4 152 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 LHFPL1Q86WI0 220 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 CADM3Q8N126 398 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
CD28-203ENST00000458610 G3V4G9 280 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 I3L521 148 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 S1PR2O95136 353 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 DHFRP00374 187 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 LGALS1P09382 135 aaKnown RBP12.55□□□□□ -0.4
CD28-203ENST00000458610 IGLL1P15814 213 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 HLA-GP17693 338 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.4
CD28-203ENST00000458610 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 SCGB2B2Q4G0G5 96 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 OXLD1Q5BKU9 147 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
CD28-203ENST00000458610 TBC1D26Q86UD7 250 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 C1QL4Q86Z23 238 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 TTC9CQ8N5M4 171 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 GNB4Q9HAV0 340 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
CD28-203ENST00000458610 UPK2O00526 184 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 SNAPC5O75971 98 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 ATG12O94817 140 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 SERPINE2P07093 398 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 RND3P61587 244 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 REC114Q7Z4M0 266 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 DUX3Q96PT4 197 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 FYTTD1Q96QD9 318 aaKnown RBP12.54□□□□□ -0.4
CD28-203ENST00000458610 OR5B12Q96R08 314 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 TSC22D3Q99576 134 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 PRRT1Q99946 306 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 THAP7Q9BT49 309 aaPredicted RBP12.54□□□□□ -0.4
CD28-203ENST00000458610 TMEM140Q9NV12 185 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 FKBP11Q9NYL4 201 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 COPZ2Q9P299 210 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
CD28-203ENST00000458610 PLXNB1O43157 2135 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 MARCH11A6NNE9 402 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 LINC01619G3V211 115 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms