RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 TMEM70Q9BUB7 260 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF735P0CB33 412 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 ZBTB25P24278 435 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 MAS1LP35410 378 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
SF3B4-202ENST00000457312 PAFAH1B2P68402 229 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 NEU1Q99519 415 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 PDCD1LG2Q9BQ51 273 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 THTPAQ9BU02 230 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 MS4A6AQ9H2W1 248 aa11.18□□□□□ -0.62
SF3B4-202ENST00000457312 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 NUDT3O95989 172 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 P0C879 139 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 DNAH10OSP0CZ25 163 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 RRASP10301 218 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 MGMTP16455 207 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 PTBP1P26599 531 aaKnown RBP eCLIP11.17□□□□□ -0.62
SF3B4-202ENST00000457312 ATP6V1E1P36543 226 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 SNRPGP62308 76 aaKnown RBP11.17□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF705AQ6ZN79 300 aaPredicted RBP11.17□□□□□ -0.62
SF3B4-202ENST00000457312 SSX7Q7RTT5 188 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
SF3B4-202ENST00000457312 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
SF3B4-202ENST00000457312 SDHAF2Q9NX18 166 aa11.17□□□□□ -0.62
SF3B4-202ENST00000457312 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 TMEM212A6NML5 194 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 NAPSAO96009 420 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 CST1P01037 141 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 DEFA4P12838 97 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 ANXA8P13928 327 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 C12orf73Q69YU5 71 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 MOB1BQ7L9L4 216 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 LINC00528Q8N1L1 170 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 OSR1Q8TAX0 266 aaPredicted RBP11.16□□□□□ -0.62
SF3B4-202ENST00000457312 C4orf36Q96KX1 117 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF184Q99676 751 aaPredicted RBP11.16□□□□□ -0.62
SF3B4-202ENST00000457312 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 Q9N2K0 584 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
SF3B4-202ENST00000457312 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.62
SF3B4-202ENST00000457312 B2RBV5 119 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 DNASE2O00115 360 aaPredicted RBP11.15□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
SF3B4-202ENST00000457312 BDKRB2P30411 391 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 PLA2G7Q13093 441 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 GLIPR1L1Q6UWM5 242 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 OR5AK2Q8NH90 309 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 SETD6Q8TBK2 473 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 FGFR1OP2Q9NVK5 253 aa11.15□□□□□ -0.62
SF3B4-202ENST00000457312 J3QLW9 94 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 NUPL2O15504 423 aaKnown RBP11.14□□□□□ -0.63
SF3B4-202ENST00000457312 ZNF19P17023 458 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 PPP3R1P63098 170 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 ACTL10Q5JWF8 245 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 GSG1LQ6UXU4 331 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 MUL1Q969V5 352 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 NEDD4LQ96PU5 975 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 RAB21Q9UL25 225 aa11.14□□□□□ -0.63
SF3B4-202ENST00000457312 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
SF3B4-202ENST00000457312 RPSAP08865 295 aaKnown RBP11.13□□□□□ -0.63
SF3B4-202ENST00000457312 PSMD7P51665 324 aa11.13□□□□□ -0.63
SF3B4-202ENST00000457312 FAAP24Q9BTP7 215 aa11.13□□□□□ -0.63
SF3B4-202ENST00000457312 CHMP1AQ9HD42 196 aaPredicted RBP11.13□□□□□ -0.63
SF3B4-202ENST00000457312 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
SF3B4-202ENST00000457312 RFNGQ9Y644 331 aa11.13□□□□□ -0.63
SF3B4-202ENST00000457312 MUC2Q02817 5179 aa11.13□□□□□ -0.63
SF3B4-202ENST00000457312 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 CGB1A6NKQ9 187 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 CRTAPO75718 401 aaPredicted RBP11.12□□□□□ -0.63
SF3B4-202ENST00000457312 DAD1P61803 113 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 TPBGQ13641 420 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 TMEM69Q5SWH9 247 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 LILRB2Q8N423 598 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 ORAI1Q96D31 301 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 ATP6V1G3Q96LB4 118 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
SF3B4-202ENST00000457312 A0A087WTM6 91 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 DAPL1A0PJW8 107 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 ZAR1LA6NP61 321 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 LINC00473A8K010 186 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 J3QRE1 110 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 KBTBD11O94819 623 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 MNAT1P51948 309 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 ATP6AP1Q15904 470 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
SF3B4-202ENST00000457312 C6orf201Q7Z4U5 140 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms