RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-222	ENST00000457264	OR2A7	Q96R45	310 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	TPRKB	Q9Y3C4	175 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264		S4R3C0	116 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	IGKV1D-8	A0A087WSZ0	117 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	TMEM213	A2RRL7	107 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264		A8MWP6	167 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	PDCD5	O14737	125 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	KBTBD11	O94819	623 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	CTXN2	P0C2S0	81 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	MAS1L	P35410	378 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	MLLT11	Q13015	90 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	ARL6IP1	Q15041	203 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	TM4SF20	Q53R12	229 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR4S2	Q8NH73	311 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	FANCD2OS	Q96PS1	177 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	RBMX2	Q9Y388	322 aa	Known RBP	12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR2W1	Q9Y3N9	320 aa		12.49	□□□□□ -0.41
MRPL55-222	ENST00000457264	TRAV25	A0A0B4J276	109 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264		A0A0J9YWU9	116 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	CASQ2	O14958	399 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	HLA-DQB1	P01920	261 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	CLEC3B	P05452	202 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	CRYGC	P07315	174 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	ZNF735	P0CB33	412 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	DEFA4	P12838	97 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	AREG	P15514	252 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	HIST1H1B	P16401	226 aa	Known RBP	12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	RAB6A	P20340	208 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	NFYA	P23511	347 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	PSMB6	P28072	239 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	RPL30	P62888	115 aa	Known RBP	12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	SSX1	Q16384	188 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	BTNL8	Q6UX41	500 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR1L6	Q8NGR2	347 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	TMEM167A	Q8TBQ9	72 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	KRTAP17-1	Q9BYP8	105 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	CCDC90B	Q9GZT6	254 aa		12.48	□□□□□ -0.41
MRPL55-222	ENST00000457264	TRBV7-1	A0A0A6YYK4	115 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	IFITM5	A6NNB3	132 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264		E7EUB6	86 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	SPRY2	O43597	315 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	RGS10	O43665	173 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	DTYMK	P23919	212 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	CRHBP	P24387	322 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	BMI1	P35226	326 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	APOC4	P55056	127 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	TNFRSF9	Q07011	255 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264		Q6ZWC4	215 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	LYG2	Q86SG7	212 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	WFDC3	Q8IUB2	231 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	SLC38A6	Q8IZM9	456 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	PUSL1	Q8N0Z8	303 aa	Known RBP	12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	TCTEX1D2	Q8WW35	142 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	MARC2	Q969Z3	335 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	CXorf58	Q96LI9	332 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	MGLL	Q99685	303 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	HSD17B10	Q99714	261 aa	Known RBP	12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	ATG5	Q9H1Y0	275 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	DUSP21	Q9H596	190 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	SPATA2	Q9UM82	520 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	TP53TG1	Q9Y2A0	90 aa		12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	KLK5	Q9Y337	293 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPL55-222	ENST00000457264	TRAV1-2	A0A0B4J238	106 aa		12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	HRAS	P01112	189 aa		12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR10A3	P58181	314 aa		12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	CDNF	Q49AH0	187 aa		12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	ZNF585B	Q52M93	769 aa		12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR2C3	Q8N628	320 aa		12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	MRPL27	Q9P0M9	148 aa	Known RBP	12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264	ELF5	Q9UKW6	265 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPL55-222	ENST00000457264		A0A1B0GW64	132 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	IGLV2-14	P01704	120 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	CTRB1	P17538	263 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	RPL8	P62917	257 aa	Known RBP	12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	KLK9	Q2XQG4	91 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	CTRB2	Q6GPI1	263 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	SSX9	Q7RTT3	188 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	DCSTAMP	Q9H295	470 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	KLK9	Q9UKQ9	250 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	UFC1	Q9Y3C8	167 aa		12.45	□□□□□ -0.42
MRPL55-222	ENST00000457264	IGKV1D-13	A0A0B4J2D9	117 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	UBE2C	O00762	179 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	REG1A	P05451	166 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	C8orf88	P0DMB2	117 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	IGKV1-13	P0DP09	117 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	GAL	P22466	123 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	MYL9	P24844	172 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	CNIH2	Q6PI25	160 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	UNQ9165/PRO28630	Q6UXU0	137 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	MFSD4A	Q8N468	514 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	TMEM217	Q8N7C4	229 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	AIFM2	Q9BRQ8	373 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	TAS2R8	Q9NYW2	309 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	ALMS1	Q8TCU4	4167 aa		12.44	□□□□□ -0.42
MRPL55-222	ENST00000457264	IGLV11-55	A0A075B6I3	123 aa		12.43	□□□□□ -0.42
MRPL55-222	ENST00000457264	MFSD2B	A6NFX1	497 aa		12.43	□□□□□ -0.42
MRPL55-222	ENST00000457264	MYOD1	P15172	320 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms