RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 TMEM230Q96A57 120 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 SCGB3A2Q96PL1 93 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 TP53RKQ96S44 253 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 C7orf50Q9BRJ6 194 aaKnown RBP11.09□□□□□ -0.63
SMPD4-215ENST00000457039 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
SMPD4-215ENST00000457039 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
SMPD4-215ENST00000457039 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 C3orf85A0A1B0GTC6 90 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 CRYM-AS1A6NIL9 109 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 VDAC1P21796 283 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 SLC35B1P78383 322 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 ZNF846Q147U1 533 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 MINDY2Q8NBR6 621 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 OR4A5Q8NH83 315 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 R3HDM4Q96D70 268 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 SLC25A21Q9BQT8 299 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-215ENST00000457039 GON7Q9BXV9 100 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 NAA60Q9H7X0 242 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 TMEM140Q9NV12 185 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 TNCP24821 2201 aa11.08□□□□□ -0.64
SMPD4-215ENST00000457039 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 LINC00854A0A1B0GVQ3 168 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 UPK2O00526 184 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 CREBL2O60519 120 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-215ENST00000457039 B3GALNT1O75752 331 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 IGHG4P01861 327 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 FGF2P09038 288 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 RPA2P15927 270 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 UCP1P25874 307 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 CCR6P51684 374 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 GNB1P62873 340 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 RNF152Q8N8N0 203 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 ADAD2Q8NCV1 583 aaKnown RBP11.07□□□□□ -0.64
SMPD4-215ENST00000457039 OR4X2Q8NGF9 303 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 GRPEL2Q8TAA5 225 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 SEC22AQ96IW7 307 aa11.07□□□□□ -0.64
SMPD4-215ENST00000457039 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-215ENST00000457039 TRAV3A0A0B4J244 114 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 SOX15O60248 233 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 CNIH1O95406 144 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 KRASP01116 189 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 SERPINE2P07093 398 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 OR5AC1P0C628 307 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 MAS1LP35410 378 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 G6PCP35575 357 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 ERVK-16P61578 105 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
SMPD4-215ENST00000457039 SUPT4H1P63272 117 aaKnown RBP11.06□□□□□ -0.64
SMPD4-215ENST00000457039 RBMS2Q15434 407 aaKnown RBP11.06□□□□□ -0.64
SMPD4-215ENST00000457039 TNXAQ16473 311 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 SP6Q3SY56 376 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 C10orf55Q5SWW7 151 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 TEX38Q6PEX7 206 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 LFNGQ8NES3 379 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 DMBX1Q8NFW5 382 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 ABHD5Q8WTS1 349 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 GLYATL2Q8WU03 294 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 SRSF12Q8WXF0 261 aaKnown RBP11.06□□□□□ -0.64
SMPD4-215ENST00000457039 GALNT14Q96FL9 552 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 CMYA5Q8N3K9 4069 aa11.06□□□□□ -0.64
SMPD4-215ENST00000457039 TEX13DA0A0J9YY54 714 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-215ENST00000457039 A0A1B0GW64 132 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 CENPXA8MT69 81 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 E7EUB6 86 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 LYRM1O43325 122 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 NDUFB6O95139 128 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 CDS2O95674 445 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 ELANEP08246 267 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 P0C879 139 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 HLA-GP17693 338 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 PSMB8P28062 276 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 IFITM3Q01628 133 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 DHODHQ02127 395 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 TMEM267Q0VDI3 215 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-215ENST00000457039 FOXE3Q13461 319 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 UNQ5815/PRO19632Q6UWF5 114 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 LHFPL5Q8TAF8 219 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 MYOZ3Q8TDC0 251 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 TMEM68Q96MH6 324 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 TMEM222Q9H0R3 208 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 TBC1D24Q9ULP9 559 aa11.05□□□□□ -0.64
SMPD4-215ENST00000457039 MSGN1A6NI15 193 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 TEX22C9J3V5 150 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 UPK1BO75841 260 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 ACTL6BO94805 426 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 IGKV1-5P01602 117 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 OR9G9P0C7N8 305 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 MYOD1P15172 320 aa11.04□□□□□ -0.64
SMPD4-215ENST00000457039 NDUFA11Q86Y39 141 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms