RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 BRWD1-AS2P59051 145 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 DYRK1AQ13627 763 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 GPR141Q7Z602 305 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
CPSF6-203ENST00000456847 USMG5Q96IX5 58 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 FYTTD1Q96QD9 318 aaKnown RBP12.49□□□□□ -0.41
CPSF6-203ENST00000456847 AIFM2Q9BRQ8 373 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 BRI3O95415 125 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 NAT1P18440 290 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 ELK1P19419 428 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 HLA-DMAP28067 261 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 MAS1LP35410 378 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 SLC25A42Q86VD7 318 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 MOB3AQ96BX8 217 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 OR4C12Q96R67 309 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 HRASLSQ9HDD0 168 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 HMX3A6NHT5 357 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 PRH1P02810 166 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 HRH1P35367 487 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 RHOGP84095 191 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 CTF1Q16619 201 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 ELOVL1Q9BW60 279 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 FXYD6Q9H0Q3 95 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 SCPEP1Q9HB40 452 aa12.48□□□□□ -0.41
CPSF6-203ENST00000456847 RBFOX2O43251 390 aaKnown RBP eCLIP12.47□□□□□ -0.418e-10■□□□□ 10.6
CPSF6-203ENST00000456847 RNASE12Q5GAN4 147 aaKnown RBP12.47□□□□□ -0.41
CPSF6-203ENST00000456847 OR4A47Q6IF82 309 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 OR6Q1Q8NGQ2 317 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 OR6F1Q8NGZ6 308 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 RSRP1Q9BUV0 290 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 PEF1Q9UBV8 284 aaKnown RBP12.47□□□□□ -0.41
CPSF6-203ENST00000456847 FAM223BA6NKX1 122 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 HPRT1P00492 218 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 RLN1P04808 185 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 ZNF182P17025 639 aaPredicted RBP12.47□□□□□ -0.41
CPSF6-203ENST00000456847 GNRHRP30968 328 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 RCVRNP35243 200 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 TAS2R31P59538 309 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 TSPAN5P62079 268 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
CPSF6-203ENST00000456847 EXOSC2Q13868 293 aaKnown RBP12.47□□□□□ -0.41
CPSF6-203ENST00000456847 ZNF343Q6P1L6 599 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 DHRS11Q6UWP2 260 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 FAM223AQ8IWN6 122 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 DMBX1Q8NFW5 382 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 OR4A5Q8NH83 315 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 B9D2Q9BPU9 175 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 AKIP1Q9NQ31 210 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
CPSF6-203ENST00000456847 NQO2P16083 231 aa12.46□□□□□ -0.42
CPSF6-203ENST00000456847 HLA-GP17693 338 aa12.46□□□□□ -0.42
CPSF6-203ENST00000456847 ATP5G2Q06055 141 aa12.46□□□□□ -0.42
CPSF6-203ENST00000456847 CMTM1Q8IZ96 169 aa12.46□□□□□ -0.42
CPSF6-203ENST00000456847 CD300LFQ8TDQ1 290 aa12.46□□□□□ -0.42
CPSF6-203ENST00000456847 ZNF257Q9Y2Q1 563 aa12.46□□□□□ -0.42
CPSF6-203ENST00000456847 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 OR2J3O76001 311 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 S1PR2O95136 353 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 ERVK-16P61578 105 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 ZNF45Q02386 682 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 RPEL1Q2QD12 228 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 EXTL2Q9UBQ6 330 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 ADAM30Q9UKF2 790 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 GPR31O00270 319 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 RBMXL2O75526 392 aaKnown RBP12.45□□□□□ -0.42
CPSF6-203ENST00000456847 TRBV12-3P01733 135 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 IL6RP08887 468 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-203ENST00000456847 ZNF735P0CB33 412 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 MYOD1P15172 320 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 RPA2P15927 270 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 ALDH3B2P48448 385 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 LYSMD2Q8IV50 215 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 PLEKHA2Q9HB19 425 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 TMEM140Q9NV12 185 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 COMMD9Q9P000 198 aa12.45□□□□□ -0.42
CPSF6-203ENST00000456847 NPIPB5A8MRT5 1133 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 SPNP16150 400 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 S100GP29377 79 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 SYNJ2BPP57105 145 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 TATDN3Q17R31 274 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 HAPLN4Q86UW8 402 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 NECAP1Q8NC96 275 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 SLC2A9Q9NRM0 540 aa12.44□□□□□ -0.42
CPSF6-203ENST00000456847 TRBV9A0A0B4J1U6 114 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 E7EUB6 86 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 PGLYRP1O75594 196 aaPredicted RBP12.43□□□□□ -0.42
CPSF6-203ENST00000456847 DHFRP00374 187 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 AREGP15514 252 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 POU2AF1Q16633 256 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 PHLDA2Q53GA4 152 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 C11orf87Q6NUJ2 197 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 C19orf35Q6ZS72 473 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 CLVS1Q8IUQ0 354 aaPredicted RBP12.43□□□□□ -0.42
CPSF6-203ENST00000456847 COMMD5Q9GZQ3 224 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 LSM4Q9Y4Z0 139 aaKnown RBP12.43□□□□□ -0.42
CPSF6-203ENST00000456847 UPK2O00526 184 aa12.43□□□□□ -0.42
CPSF6-203ENST00000456847 REG1AP05451 166 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms